KEGG   Nitrosopumilus cobalaminigenes: C5F47_00500
Entry
C5F47_00500       CDS       T06688                                 
Name
(GenBank) Lhr helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ncl  Nitrosopumilus cobalaminigenes
Brite
KEGG Orthology (KO) [BR:ncl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncl03400]
    C5F47_00500
Enzymes [BR:ncl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C5F47_00500
    5.6.2.6  RNA 3'-5' helicase
     C5F47_00500
DNA repair and recombination proteins [BR:ncl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C5F47_00500
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WH_Lhr ResIII SNF2-rel_dom Cas3-like_C_2 DEXQc_Suv3 AAA_19 HypA Zn_ribbon_8 AAA_11
Other DBs
NCBI-ProteinID: QLH02172
UniProt: A0A7D5LYM8
LinkDB
Position
93753..96494
AA seq 913 aa
MKDHDQTIPSNLPLDSLFGKFGFSKLTEIQKKASPIILQKKDCLVIAPTGSGKTECSVIP
IFSLLKNSKQSGKIKTLYITPLRALNRDVFRRITNYAHENQLTIKIRHGDTSQKDRKKIT
ENPPDVLITTPETLVILLTQVKMLNALSDLEWIVIDEVHELLSSERGSQLSLSVERLELN
SKYSLTKVGLSATVGNFDEAGKFVVGTKRKCQIIRDTSVRKYDVEIKYVEGTISDVAEKI
IEYVLELKLDSPILLFTNTRGEAEFLASVLKQKSSVPIELHHGSLSKEVREETEQTLREG
KHGIVVCTSSLELGLDIGSVELVIHYGSPRQVSKFVQRIGRSKHNRDESAQGLIITNNPD
DEFEAQAILDRIQEGSIEEQKIHDGSLDVLAHHLVGLSMQIGEITVEQAFELVTKAYSFR
NLKIEDLIDVLDLLDSNYLIFFDRTKMTYWKKGGSFKYYFENLSTIPDILKFKVFDSVGK
KIIGSLDQRFVGDHGDSGNIFVLKGSQWRILNVDEKSFSVNVEPFRGGGITVPYWEGESI
PIDYKTARKVGNFRSKVKNGNFTLTNNIIEKLNFDKIPDENNLVIESNRSQGSIVIHSCL
GTKINSTLSTLLSSILSSMLGSIVDSRSDGYRIVLSSNSRISEKLFIEVIKDDYDLQSVV
SASLTGTHNVNWKTWCVAKKFGVVGRGAIYERKSARFLYERYSKTALVHEALRELFHDKY
DLKNSEKILKKIKEDEIHLTWLEVDQYSKLALPILDHTAKYYSSPANLDKGILDLVKARL
EKTKHRLICARCGKWERVFQTSEVKNLLVCPYCKARQITATYYSDYDLPKIIRKKHDGKR
LTADEKHKYDRAWKVASLVENFGKIAITVISGYGVGADTAARILRNMVDEEHLFKQIYEA
ERQYVVTRGFWDS
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgaaagatcacgatcaaacaatcccgtcgaatctacctcttgattcattatttggaaaa
ttcggattttctaaactaactgagattcagaaaaaagcatcaccaataattttacaaaaa
aaagattgtcttgttattgctccaacaggttctggaaaaacagaatgttcagtaattccg
attttctctttgttaaaaaattctaaacaatctggaaaaattaaaaccctttacatcaca
cctttacgagccttaaatcgtgacgtgtttcgaagaattacaaattatgcacatgaaaat
caactgacgattaaaattcgacatggagatactagccaaaaagatagaaaaaaaataact
gaaaatcctcctgatgttttaatcacaactcctgaaactttggtaattctattaacacag
gtaaaaatgctcaatgcattatctgatttagaatggattgtaatagatgaagtacatgaa
ttattatctagtgagcgaggttctcaattatcattaagtgttgaaagattggaattaaat
tcaaaatactcacttacaaaagttggattatctgcaactgtaggaaattttgatgaggca
ggaaaatttgtcgtaggaactaaaagaaaatgtcagataatcagagatacatcagttagg
aaatatgatgtagaaatcaagtatgttgaaggaacaatttcagatgttgcagaaaaaata
attgaatatgtgctagaattaaagttagattctccaatacttctctttacaaataccaga
ggagaggctgaatttttagcatcagttttaaaacaaaaatcttctgttccaatagaacta
catcatggttctctctcaaaagaagttagagaagagacagaacaaactttgcgtgaaggc
aaacatggtatcgtagtatgtacctcttccttggaattaggattagatattggctcagtt
gaattggtgattcattatggttctccaagacaagtatcaaaatttgttcaaagaataggt
agaagtaaacataatcgtgatgaatcagctcagggtttaattattacaaataaccctgat
gatgagtttgaagcacaagcaattcttgatcgtattcaagaaggctccattgaagaacaa
aaaattcatgatggatctctagatgttttagctcatcatttagttggactatctatgcaa
attggtgaaattacagttgaacaagcttttgaattagtgacaaaggcatattcatttaga
aatttaaaaattgaagatctcatagatgtattagatttacttgattcaaactatctaatt
ttttttgatagaacaaaaatgacttattggaaaaaaggcggttctttcaaatattatttt
gaaaatctttccacaatacctgatattcttaaattcaaagtttttgatagtgttggaaaa
aaaatcattgggtctttagatcaaagatttgtaggagatcatggagattcaggaaatatt
tttgtgctgaaaggttcacaatggagaattctaaatgttgatgaaaaatcattcagtgta
aatgttgaacctttcaggggaggaggaattacagtaccttattgggaaggagaaagtata
cctattgactataaaacagcacgtaaagtaggaaatttccgtagtaaagtaaagaatgga
aattttactttaacaaataatataattgaaaaattaaattttgataaaattcctgatgaa
aataatcttgttattgaatcaaatagatctcaaggttcaattgtaattcattcttgtctt
ggtactaagatcaattctactttatccacattactatcttcaatactatcatctatgtta
ggttcaattgttgattctcgttctgatggttacagaattgttttatcatctaattctaga
atttcagaaaaacttttcatagaagttattaaagatgattatgatttacaatctgttgtt
agtgcttctttaactggaactcataatgtcaattggaaaacatggtgtgttgcaaaaaaa
tttggagttgtaggacgtggagcaatatatgaaagaaaatctgccagatttttatatgaa
cgatactccaaaacagcacttgtccatgaagcactacgagaattatttcatgataaatat
gatcttaaaaattctgaaaaaattctgaaaaaaatcaaagaagatgaaattcatctcact
tggttagaagttgatcaatattctaaattagctctgccaattttagatcatactgcaaaa
tattattcttcacctgcaaatcttgacaaaggtattcttgatcttgttaaagctagatta
gaaaaaacaaaacatcgtctgatttgtgctcgatgtggaaaatgggaacgtgtttttcaa
acatctgaggtaaaaaatttactcgtttgtccatattgtaaagcaaggcaaattactgca
acatactattctgattatgatttacctaaaattattagaaaaaaacatgatgggaaaaga
ttaactgcagatgaaaaacacaagtatgatcgtgcctggaaagttgcatcattagtagaa
aattttggaaaaattgctattactgtaatttctggatatggtgttggtgctgatactgca
gcaagaatcttaagaaatatggtagatgaagaacatttgtttaaacaaatctatgaagca
gaaagacaatatgtagtaactagaggtttttgggattcttag

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