Nitrosopumilus cobalaminigenes: C5F47_01305
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Entry
C5F47_01305 CDS
T06688
Name
(GenBank) RNA helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
ncl
Nitrosopumilus cobalaminigenes
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncl03400
]
C5F47_01305
Enzymes [BR:
ncl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C5F47_01305
DNA repair and recombination proteins [BR:
ncl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
C5F47_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_dom4_arc
Helicase_C
ResIII
HHH_5
DEXQc_Suv3
DNA_pol_lambd_f
HHH_2
HTH_61
AAA_25
ATPase_2
nSTAND3
Terminase_6N
DnaB_C
DUF7898
ASLyase_C
Motif
Other DBs
NCBI-ProteinID:
QLH02302
UniProt:
A0A7D5R5Y3
LinkDB
All DBs
Position
236256..238382
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AA seq
708 aa
AA seq
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MNIDKLKLPESAIEFLKSQGFTKLYPPQADSIKSGLLDGKSILVSAPTASGKTLIAMLAM
LSFLSKNKGKVIYLSPLRALAAEKFTEFKKLEKIAIGNKIKVAISTGDFENIEKNLEKSN
VLILTNEKMDSIIRHGSEWVDEIGLVISDEVHLIGDESRGPTLEMILTQLKLLETKPQIV
GLSATITNSDEIADWLECKLVKNDWRPVPLSEGVCDEGQVTMSDGKTFEVERSLMGTPID
LGVQSVREGGQSLVFAETRTRSKSLATKASDTISKILEKKEITELEKTSKKLLSENEHTE
LVKTLASLVKKGVAFHHAGLNQKCRETIETEFRKGTIKLLSSTPTLAAGVNLPARRVVIS
NINRYNAKVGANRPISILEYKQLCGRAGRPQYDDFGESIIVGNGNTEDLIEYYINGEPEP
IESKITDDKSLRTHILSVIVTHPGIKKEEILEFFLQTLGGLQSRKPTIKFAIDISLRFLS
SKFLIIKKGERYAATEFGKKTSMLYIDPLTATYFSDSIENVSEERKHTFGYLHLITNCEE
FFPKFSLRQKDYETASLMIENNSSQLLEPISEYDCSRSLLALQSWITESTELSLSDSLGI
ESGDMHRMTENANWLSYCLREISKHVERADLLEELGDLRNRVVYGIREELLDLVRVKGIG
RVRARILFKHGIKNLDDLRKIPVNKLAEIDKIGSTIADNIKAELRKVR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagataaactaaaacttcctgaatctgcaattgaatttctaaaatcacaaggt
tttacaaaattatatcccccacaagcagatagcataaagtccggactgttagatggaaaa
agcatactagtttcagctcctactgcaagtggaaaaactttgattgccatgcttgcaatg
cttagttttctatcaaaaaacaagggtaaggtaatttatctcagtccactaagagcatta
gctgctgaaaagtttacagaatttaaaaaattagaaaaaattgccataggaaataaaata
aaggttgcaatatctactggtgattttgaaaacattgaaaaaaatctagagaaaagtaac
gtgttaattttaacaaatgaaaaaatggattccataattagacatggatctgaatgggtt
gatgagattggtctagtaatttctgatgaagtccatttgattggtgatgaaagtaggggt
ccaacacttgagatgattcttacacaactcaaactcttagaaacaaaacctcagattgta
ggtcttagtgcaacaattacaaattctgatgagattgcagattggcttgaatgcaaactg
gtaaaaaatgactggagaccagtcccactatctgaaggagtatgtgatgaagggcaagtt
acaatgagtgatggtaaaacctttgaagttgagcgtagtttgatgggcacgccgatagat
ttaggcgtacaatccgtaagagaaggaggtcaatccctggtatttgcagagactagaacc
cgttcaaaatctcttgcaacaaaagcatctgatacaatatctaaaattttagaaaaaaaa
gaaattaccgaactagaaaaaacatcaaaaaaacttctatctgaaaatgaacatactgaa
ctagtcaagacattggcatcactggtaaaaaaaggagttgcgtttcatcatgcaggacta
aatcaaaaatgtagagaaacaatcgaaactgaatttcgtaaaggaacaattaaactatta
tcatcaactcctactctagctgctggtgtcaatcttcctgcaagacgagtagtaatttct
aatatcaatagatataatgcaaaagttggagcaaatagaccaattagtattctagaatac
aaacaactttgtggaagagctggaaggccccaatacgatgattttggagaatcaattatt
gttggaaatggaaatactgaagatcttatagaatattacattaatggagaacctgaacca
attgaatcaaaaattacagatgacaaatctttgcgtactcatattctaagtgtcatagtt
acacatcctggaatcaaaaaagaagaaattttagaattctttttacaaacattaggtgga
ctacaatcaagaaagcctacaataaaatttgctattgatatatcattacgttttctttca
agtaaatttcttataattaaaaaaggtgaacgatatgcagcaactgaatttggtaaaaag
acttcaatgttgtatattgatccgttaactgcaacatactttagcgattcaattgagaat
gtctctgaagaaagaaaacatacgtttggatatttacatctgattacaaattgtgaagaa
tttttcccaaaattttcactacgacaaaaagactatgaaactgcaagtttaatgattgaa
aacaattcatcacagctattagaaccaatttcagagtatgattgttcaagaagtctttta
gctttacagtcatggattactgaatctactgaattatctctatctgacagccttggaatt
gagtctggtgacatgcatagaatgactgagaatgcaaactggctatcttattgcctcaga
gagatttccaagcacgtagagagagcagatttacttgaagaattaggtgatttgagaaat
agagtggtttatggaattagagaggaattacttgatttggtaagagtaaaaggaattgga
agggttagggctcgaattctctttaaacatggaattaagaatctagatgatttgaggaaa
attccagtgaataaattagcagaaattgataaaattggttcaaccattgcggataacata
aaggcagagttacgaaaggttagataa
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