Nitrosopumilus cobalaminigenes: C5F47_01580
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Entry
C5F47_01580 CDS
T06688
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
ncl
Nitrosopumilus cobalaminigenes
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncl03009
]
C5F47_01580
Ribosome biogenesis [BR:
ncl03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
C5F47_01580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
Fer4_6
Fer4
SMC_N
Fer4_7
Fer4_21
Fer4_2
Fer4_10
RsgA_GTPase
Fer4_3
Fer4_9
MMR_HSR1
Fer4_16
AAA_29
Fer4_4
AAA_16
DLIC
Rad17
Motif
Other DBs
NCBI-ProteinID:
QLH03756
UniProt:
A0A7D5QYD8
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All DBs
Position
complement(279482..281269)
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AA seq
595 aa
AA seq
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MTHRVAVLDQDLCQPQKCGLECIKYCPVNKSGSECVTINEESKKAQIDEDICNGCGICVK
VCPFDAITIVNLASELATDKIHQYGMNSFRLYKLPTPKKGEVVGLLGRNGMGKSTVVNIL
SGNLKPNLGRYENPPEWDEILKHYSGTELKQHFEKIKQNQIRASIKPQQVHHIAQAFDGT
GKELLDKYDERGVSRELIKELGLENSMEQSLKELSGGELQRIAVAASASKDTEFYFFDEP
SSYNDVFQRTGVARVIQNLAKIGKSVMVVEHDLTLLDFLSDYIEVLYGEPTAYGIVSNIL
STKIGINVFLDGYLPTENVRFRDKKFSMDVSSSTTDIFQEGSDIVSYPKLVKKYPSFSVE
IEPGRVRKGEVVGIMGANALGKTTMMKMIAGVEKPDSGSVDKKIKIAYKPQYLQNDLDVE
VISVLDKANGDPVEGSMEEEQILDPLKIKKLYNKSIKNLSGGELQKIAVASCLLQKVDLY
ALDEPSAFLDVEDRIAVAKFLQKFVRSFGKSAIIIDHDLQLMDLVSDTMVIFEGESGAAG
KATSPMPKADAMNRFLKSLDMSFRRDEKSLRPRVNKLESRLDKDQKTTGNFYYKH
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgactcatagagtagccgttttagatcaagatctgtgtcaaccacaaaaatgtggccta
gagtgtatcaaatactgtccagtcaataaatcaggctcagaatgtgttactatcaacgaa
gagtcaaagaaagcccagattgatgaagacatttgtaatggttgtggaatttgtgtcaaa
gtatgtccatttgatgcaattacaattgtgaatctagcaagtgaattagctactgacaaa
attcatcaatatggaatgaactcatttagactttacaaattgcctacaccaaagaaaggt
gaagttgtaggattattaggaagaaatggaatgggtaaaagtactgttgtaaatattctg
tcagggaatcttaaaccaaatttgggcagatatgaaaatcctcctgaatgggatgaaatt
ttaaaacattatagtggaactgaattaaaacaacattttgaaaaaattaaacaaaatcaa
attcgtgcatcaattaaaccacaacaagtccatcatattgctcaagcatttgatggtacc
ggaaaagaacttcttgacaaatatgatgaacgaggagtttcaagagaactaatcaaagaa
ttaggattagaaaattcaatggaacagagtttgaaggaattaagtggtggtgaattacaa
agaattgcagttgctgcatctgcatcaaaagatacagaattttattttttcgatgaacca
tcatcttacaacgatgtttttcaaagaacaggagttgcacgagttatacaaaatttagca
aagataggaaaaagtgtgatggtagtagaacatgatttaacattattagattttctaagt
gattacatagaggtattgtatggtgaaccaacagcatatggaattgtttcaaatatttta
tcaaccaaaattggaatcaatgtgtttttagatggatatttaccaactgaaaatgtaaga
tttagagataagaaattttcaatggacgtatcatcttcaactacagacattttccaagaa
ggtagcgatattgtttcatatccaaaattagtaaaaaaatatccttcattttcagtagaa
attgagcctggaagggtaagaaaaggagaggttgtgggtataatgggtgcaaatgcacta
ggtaaaactacaatgatgaaaatgatagctggtgttgaaaaaccagattctggtagtgtg
gataaaaaaattaagattgcttacaaaccgcaatatcttcaaaatgatcttgacgtggaa
gtaatttcagttctagataaagcaaatggagatccagtagaaggaagtatggaagaagaa
caaattcttgatccattaaaaattaaaaaactctacaataaatctatcaaaaatctttcc
ggaggagaacttcaaaaaatagcagttgcatcatgcctgttacaaaaagttgatttgtat
gcattagatgaaccttcagcatttttggatgtagaggatagaattgcagttgcaaagttc
ttacaaaaatttgttcgctcttttggaaaatccgcaatcataattgatcatgatttacaa
ttaatggatttagtttcagacacaatggtaatatttgaaggagagtcgggtgctgcaggt
aaagcaacatcaccaatgccaaaggctgatgccatgaacagatttctaaaatcactagac
atgtcgtttagaagagatgaaaaaagtctaagaccacgtgtaaataaattagaaagtaga
ttagataaggatcaaaaaacaactggaaacttctattacaagcattga
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