Nitrosopumilus cobalaminigenes: C5F47_02225
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Entry
C5F47_02225 CDS
T06688
Name
(GenBank) ribosome assembly factor SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C5F47_02225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncl03009
]
C5F47_02225
Ribosome biogenesis [BR:
ncl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
C5F47_02225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Toxin_15
Motif
Other DBs
NCBI-ProteinID:
QLH02462
UniProt:
A0A7D5R643
LinkDB
All DBs
Position
391444..392130
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AA seq
228 aa
AA seq
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MVDVTLVRYSFEGEKFEIMVKPDPALDFKMGKKKDISAVLVSDEIYTDSGKGTRPSSEKL
LKAFKTEDQTEIAQIILEKGDLNLTTDQRRKMVEDKKKQIVTFIAKTYVDPKTHLPHPPL
RIEQAMKDGRVSVDPQKNAEEQVKDIVEKLRSIIALKTESLQLEITIPAQFASQSYAVLK
SVGSLKSEEWQNNGSLKAILEIPAAARPNVIDRLGSITKGSASVEVVQ
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgtaacattagtaagatattcctttgaaggggaaaaatttgagattatggta
aagcctgatcctgcattggatttcaaaatgggaaagaaaaaagatatttccgcagtttta
gtttctgacgaaatttacactgattctggaaaaggtactaggccttcttctgagaaatta
ctcaaagctttcaaaactgaagaccagactgaaattgctcagattattctagagaaaggt
gatctaaatcttactactgatcaaagacgaaaaatggtagaagacaagaaaaaacagatt
gttacgtttattgccaaaacctatgtggatccaaaaactcacttgcctcaccctccgttg
agaattgagcaagcaatgaaagatggaagagtttcagttgatcctcaaaaaaatgctgaa
gagcaggtaaaagatattgttgaaaaacttcgttcaatcattgccctaaaaacagaaagc
ctacaattggaaattactattccggcacaatttgcatcccaatcatatgcagttctaaaa
tcagtaggttctctaaaatctgaagaatggcaaaataacggttcactaaaagcaatactt
gaaatacccgctgcggcaaggccaaacgtgatagacagattaggttctataactaagggt
tcagcttcagttgaggtagttcaataa
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