KEGG   Nitrosopumilus cobalaminigenes: C5F47_02720
Entry
C5F47_02720       CDS       T06688                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ncl  Nitrosopumilus cobalaminigenes
Pathway
ncl02024  Quorum sensing
ncl03060  Protein export
ncl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ncl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C5F47_02720
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C5F47_02720
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C5F47_02720
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ncl02044]
    C5F47_02720
Enzymes [BR:ncl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C5F47_02720
Secretion system [BR:ncl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C5F47_02720
  Eukaryotic Sec-SRP protein
   C5F47_02720
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_17 nSTAND3 CbiA AAA_18 MobB Zeta_toxin ParA MeaB APS_kinase PduV-EutP AAA_33 KTI12 cobW AAA_31 6PF2K AAA_16 AAA_5 AAA_30 AAA AAA_24 MMR_HSR1 ABC_tran Thymidylate_kin NTPase_1 G-alpha IstB_IS21 Arf ResIII ATP_bind_1 LpxK TssR_C NPHP3_N AAA_28 LytR_C SpoVIF NACHT
Other DBs
NCBI-ProteinID: QLH02550
UniProt: A0A7D5M1R1
LinkDB
Position
466737..468065
AA seq 442 aa
MLDGLKTSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKNLEERAL
NETPPPGLSRKDHIVKILYDELSKLLGNESNFDFKPDRQNKIILLGIQGSGKTTVASKLA
KFLTGQGYKVGVVGADTYRPGALVQLRTMCEKSNVEVYGEENNKDSPNIVKNGLKHFAGQ
TLDVIIIDTAGRHKEEQDLLEEMERINKVADPDLALLVIDGTIGQQCFNQAEAFHKTIPV
GGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDIQA
VLDLAKRLENEGDDVRMKRISSGKMNMEDFLSQLEEVSKMGSLQGILDSMPGLSGMVKGD
QVDQMEGRVTKWRYIIQSMTKAEKADPEGLLNSSRIKRISRGSGWPEGEVKELIKNYKNS
KNMMKASKGRQMQGTLRKMGLG
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgcttgatggccttaagacaagtttaggggacgcaatcaaaaaaattgtaaaatcttca
ggaattgatgaggagttaatcaaagaactctcaaaagatgttcaaagggcattattgcaa
tctgatgttaatgtgcgacttgtactagaaattacaaaaaatcttgaggaacgtgctcta
aacgaaacacctcctcctgggctttcacgcaaagatcatatcgtgaaaattctctatgat
gaactatcaaaactacttggaaatgagtccaattttgattttaaacctgataggcaaaat
aagataattttacttggaattcaaggcagtggtaaaactactgtggcatcaaaacttgcc
aaatttttaactggtcagggatacaaagttggtgttgtaggtgctgatacctaccgccca
ggtgcattagttcaactaagaaccatgtgtgaaaaatcaaatgttgaagtttatggagaa
gaaaataacaaagattctcctaacattgtaaaaaatgggttaaagcattttgcaggccaa
actttggatgtaattataattgatactgctggtcgtcataaagaagaacaagatttactt
gaagagatggaaaggattaacaaagtagcagatcctgatttagctttacttgtaattgat
ggtacaataggacaacaatgtttcaatcaagctgaagctttccacaaaactattcctgtt
ggaggtgtaatcattacaaaattagatagttctgcaaaaggtggtggtgcacttgcagca
tctgcagcaactggtgcacaaataatgtacattggaactggtgagagaattgatgattta
gaaaaattctctcctactaggtttgttggaagattacttggaatgggtgacattcaagct
gttttggatttagctaaacgattagaaaacgaaggtgacgacgttagaatgaaaagaatt
tctagtggaaaaatgaacatggaggattttctttctcagttagaagaagttagcaaaatg
ggttcgttgcaaggaattcttgacagtatgcctggtttatctggaatggtaaaaggtgat
caagttgatcaaatggaaggtagagttaccaaatggagatacattattcaaagtatgacc
aaagcagaaaaagcagaccctgaagggttgcttaactcatctagaatcaaaagaatatcc
cgtggttcaggatggcctgagggtgaagttaaagaattaataaaaaattataaaaattct
aagaatatgatgaaggcttcaaaaggccgtcaaatgcaaggaactcttagaaaaatggga
ttaggataa

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