Nitrosopumilus cobalaminigenes: C5F47_03270
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Entry
C5F47_03270 CDS
T06688
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
ncl
Nitrosopumilus cobalaminigenes
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncl03016
]
C5F47_03270 (endA)
Enzymes [BR:
ncl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
C5F47_03270 (endA)
Transfer RNA biogenesis [BR:
ncl03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
C5F47_03270 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Ribosomal_L22e
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
QLH02647
UniProt:
A0A7D5M1T9
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All DBs
Position
complement(555755..556291)
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AA seq
178 aa
AA seq
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MKSELIENRIIVWNIEDSRKLFSQGYYGKPIGIPKPKIEEIDAPLILDLIEGLYLLENKK
ITITKSKQRVTVDELIEICKKEVHEFDKKYLVYKNFRDKGYIINPGIKFGCDFAVYEKGP
GIDHAPFLIQVYTRSEPITSTGIVLAGRLATSVKKQFILAIPKGKEKVDFLALDWWKA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgaattaatcgaaaatcgaatcatagtatggaatattgaggattcacgaaaa
cttttcagtcaaggatattacgggaaaccaataggcataccaaaaccaaaaattgaagaa
atagatgctccattaattttagatcttatagaaggattgtatctattagaaaataaaaaa
attacaattacaaaatccaaacaaagagtaacagttgatgaattaattgaaatatgtaaa
aaagaagttcatgaatttgataaaaaatatctagtatacaagaattttagagataaaggg
tacattatcaatccaggaattaaatttggatgtgactttgcagtttatgagaaaggacca
ggaattgatcatgctccatttttaattcaagtgtatacaagaagtgaaccaattacatcc
acaggtattgttctagcaggcagactagctacaagtgttaagaaacaattcatcttggca
attcctaaaggcaaagagaaagtagatttcttggctttagattggtggaaagcttag
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