Nitrosopumilus cobalaminigenes: C5F47_03760
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Entry
C5F47_03760 CDS
T06688
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F47_03760 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncl03021
]
C5F47_03760 (tfb)
Transcription machinery [BR:
ncl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C5F47_03760 (tfb)
Prokaryotic type
Archaeal type
TFB
C5F47_03760 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
HTH_AsnC-type
HTH_11
Ribosomal_S27
HTH_Crp_2
HTH_3
ORC6_2nd
Zn_ribbon_tTFIIB
Ribosomal_L37e
RB_B
Zn_Ribbon_1
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QLH02733
UniProt:
A0A7D5LZ33
LinkDB
All DBs
Position
640655..641554
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AA seq
299 aa
AA seq
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MENPSCARCGKNSILSDEVTGEQFCGKCGYVIDGKTQESGPEWRSFQKDGGADPARTGAP
SSLMIHDMGLSTVINPLNKDASGKPLSTSMKSTIERLRTWDSRSQVHAPVDRNLRQALSD
LNKLKDKVAIPANVLEKAAYIYRKALEKKLVRGRSISAMIAASLYAACRDTETPRTLKDV
ADAANVKRKDIARCYRLLHHELELKMPVVDSIQCIARISSKLEISEKTKRYAVKVLKEAQ
DRKESAGKDPMGLAATALYLSCVKNGVSITQRDLAEAAGVTEVTIRNRYKGLKAEQSTK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatccatcttgtgcacgttgtggaaaaaattccattctgtctgatgaagttaca
ggtgaacagttttgtggaaagtgtggatatgtaattgatggaaaaactcaggaatctggt
cctgaatggagatcatttcaaaaagatggtggtgcagatcctgcaagaactggtgctcct
tcgtcattgatgattcatgacatgggtctctcaactgtaatcaatcctctaaacaaagat
gcatctggaaaaccactttcaacatctatgaaaagtactattgagagattacgaacttgg
gatagtagaagtcaagttcatgctcctgttgacagaaatttaagacaagctctaagtgat
ttaaataaattaaaagataaagttgcaattcctgcaaacgttttagaaaaagcagcttac
atttatcgaaaagctttagaaaagaaattagttcgaggaagatctatttctgcaatgatt
gctgcatccctgtatgcagcttgtagagatacagaaactccacgaactctaaaagatgtt
gctgatgctgcaaatgttaaacgaaaagacattgcaagatgttacaggttactccatcat
gaattggaattaaaaatgcctgtagttgattccattcaatgtattgcaagaatttcaagt
aagcttgagatttctgaaaaaactaaacgttatgcagtcaaagttctcaaagaagcacaa
gaccgtaaagaatctgctggaaaagatcctatggggcttgcagcaactgcactttatctt
tcctgcgtcaagaatggtgtatcaataactcaaagggatcttgcagaggctgcaggagtg
acagaagtaacaataagaaatcgttacaagggtttgaaagcagaacagtcgacaaaataa
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