KEGG   Nitrosopumilus cobalaminigenes: C5F47_05550
Entry
C5F47_05550       CDS       T06688                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ncl  Nitrosopumilus cobalaminigenes
Pathway
ncl03030  DNA replication
ncl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ncl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C5F47_05550
   03410 Base excision repair
    C5F47_05550
   03450 Non-homologous end-joining
    C5F47_05550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncl03032]
    C5F47_05550
   03400 DNA repair and recombination proteins [BR:ncl03400]
    C5F47_05550
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncl04147]
    C5F47_05550
DNA replication proteins [BR:ncl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    C5F47_05550
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     C5F47_05550
DNA repair and recombination proteins [BR:ncl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     C5F47_05550
Exosome [BR:ncl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   C5F47_05550
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc CTLH_Armc9
Other DBs
NCBI-ProteinID: QLH03048
UniProt: A0A7D5M2L7
LinkDB
Position
921462..922481
AA seq 339 aa
MGLNLKELVIREKTTLEAFSNKVIAIDAYNAIYQFLASIRGPDGLQLTDAEGRITSHLSG
LLYRNVNFLSLGIKPVYVFDGKPPSLKTAEIERRKQIKKDATVKYEKAVAEGNMEDARKF
AQQTTSMKDGMVKDSKEFLTYFGIPYIEAPSEGEATAAHLTNTGQAYASASQDYDSILCG
AKRLVRNFTSSGRRKIPNRNTYIDVLPEIIETQKVLDSIEMTREELIDVGILIGTDFNPN
GFERIGPKTAMKLIKQHSRLEDIPQIQEQLEEIDFQQIREIFLNPEVADVDEIVFNDVDH
EGVMKYLKERSFSEDRIQSTLNRLKKALEKKSQNLDQWF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgggattaaacctaaaagaattggtgataagagagaaaacaactctagaggcattttca
aataaagtgatagcaattgatgcttacaatgcaatttaccagtttttggcaagtatcaga
ggaccggatggattacaactaacagatgcagaagggagaattaccagccacctaagcgga
ttattatacagaaatgtgaatttcttatcactaggaattaaaccagtttatgtttttgat
ggaaaacccccatcactgaaaactgctgaaattgagcgcagaaaacaaatcaaaaaagat
gccactgtaaaatatgaaaaagcagttgcagaaggaaatatggaagatgcaaggaaattt
gcacagcaaacaactagcatgaaagatggaatggtaaaagactcaaaagaatttctaaca
tattttgggattccatacattgaagcaccatcagaaggtgaggcaactgcagctcatcta
acaaatacaggtcaagcatatgcatctgccagtcaagattatgattctattttatgcggg
gcaaaaagactagtaagaaatttcaccagtagcggaagaagaaaaattccaaatagaaat
acctacattgacgtattaccagaaattattgaaactcaaaaagtattagattccattgaa
atgacaagagaagaattaatcgatgtaggaattttaattggtacagattttaatccaaac
ggatttgaaagaattggcccaaagacggcaatgaaactaatcaaacaacattccagattg
gaagacattccccaaattcaagaacagttagaagaaatagattttcaacaaataagagag
atatttctaaatccagaagttgcagatgtggatgaaattgtattcaatgatgtcgatcat
gaaggagtaatgaaatatcttaaagaaaggagtttttctgaggatagaattcaatcaact
ctaaacagattaaaaaaagctttagagaaaaagagtcaaaatctcgatcaatggttctaa

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