Nitrosopumilus cobalaminigenes: C5F47_05675
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Entry
C5F47_05675 CDS
T06688
Name
(GenBank) collagen-like protein
Organism
ncl
Nitrosopumilus cobalaminigenes
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
QLH03072
UniProt:
A0A7D5LZX2
LinkDB
All DBs
Position
complement(943917..945551)
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AA seq
544 aa
AA seq
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MSSQPRLEIQGQAPFKQSGVYEAQIAITDSKPTDDDIRTKQFSSLWRGNFHLRVKDGMFS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NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatctcagccacgattagagattcaaggacaggcacctttcaaacaatctggtgta
tatgaagctcaaattgcaattactgacagtaaacccactgatgatgatattagaacaaaa
caattttcttctttatggagaggtaatttccatcttagagttaaagatggcatgttttca
gagaccataggttctcctgcaaatcctcttcctgcaactattgcaaatcttgacaaagtt
tggattgttgtaactgatctcttttcatcattacatactgtgtttgatgttccattagca
agaactgcatcacaatctgaagttaaaactgaaacaaaaactgaatctgtttctcaaaca
aaagatgttccaaaacctaaacgttctcaaaaaacatctgttgctagctctcctggtcca
gccggagctcctggtgacaaaggtcctactggtccagccggaccagctggtgacaaaggt
ccgataggtcctcctggtcaacaaggtcctgtcggaattaaaggccctgaaggtccaaag
ggaccagctggtgacaaaggagctactggtgacaaaggtcctcaaggtgataaaggaatt
tctggagatagaggattaactggtgataaaggaattacaggcgataaaggcgataaaggc
gataaaggaattactggtcctcctggtgacaaaggagaaaaaggtcctactggccccatt
ggtgataaaggattatctggattaaaaggtcctcttggtgacaaaggagaaaaaggtcca
acaggtcctgttggtgataaaggtggagctgggttaagaggtgtccctggagaaaaaggt
gacaaaggtccacaaggtgtttctggcgataaaggattaactggtccgtctggacctcct
ggagaaaaaggtccaaccggattatctggggttcaaggagaaaaaggaattcaaggtggt
cctggtccaattggtgacaaaggtccaaacggaccagctggtgacaaaggtccgataggt
ccacctggtccacatggtgataaaggattaactggtccaaacggaccagctggtgacaaa
ggtccgataggtccacctggtccaattggagaaaaaggaaacaaaggtactgaaggtcca
attggagaaaaaggtccgcaaggtccgcaaggtcctgctggttctaaaggattaactggt
gttccaggtccacaaggtgaaaaaggagaaaaaggttctgtaggtccaattggagaaaag
ggacaaacaggtccaataggtgctcccggagaaaaaggtccgcaaggtccacaaggttct
caaggtgaacgtggaaccactggtccttctggagaaaaaggtccgcaaggtccacaagga
attcaaggaccacaaggtgaacgaggtccaacaggtccaataggttctataggcgaacaa
ggtccagtaggaggacaaggtccagtaggtcctgcaggtccaagaggtccgccaggtcct
cccggagaaaaaggtccatcaggtggaatgtcttctgaacaaaaagcaatcttcaaagat
ttgttagaaattttaactaacaaagacattatcactactgaagaacaaattaaattaatg
agctatctttactga
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