Nitrosopumilus cobalaminigenes: C5F47_06195
Help
Entry
C5F47_06195 CDS
T06688
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
ncl
Nitrosopumilus cobalaminigenes
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncl03016
]
C5F47_06195
Enzymes [BR:
ncl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
C5F47_06195
Transfer RNA biogenesis [BR:
ncl03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
C5F47_06195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
ELP3_N
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
QLH03167
UniProt:
A0A7D5M2J8
LinkDB
All DBs
Position
1035190..1036776
Genome browser
AA seq
528 aa
AA seq
DB search
MNKLDPVLSKACNEITQNLLTIQEPSKKQVKEEIIKICTKYALERIPRNYEILSMAKESD
FDKLKKVLLRKPAKTASGVSVVALMPKPYACPHGRCTYCPGGIEFNSPNSYTGKEPSSLN
AIENEFDPKLQITSKIEKLIAFGHDPSKMEIVIVGGTFLFMPKDYQKDFIKSCYDALNDT
DSKDLEEAKSNNEHAAIRNVGFTIETKPDYCKQEHVDLMLSYGITRIEIGVQSLQERVYK
IVNRGHNYNDVVESFQISKDAGYKIVAHMMPGLPTMTPEGDIADFKKLFSDPQLRPDMLK
IYPSLVIENTPLYEEHKQGKYIPYSDEDMIKVLTEAKKDIPKWVRIMRVQREISPKEIIA
GPKSGNLRQIVHQNLAKQGLSCKCIRCREAGLSNKKTDGGDVKLNRINYDSSGGKEVFLS
YEDKNESIYGFLRLRKPSIDAHRDEIDQDTCIVREIHVYGKSLKLGEKGGDEIQHSGLGK
NLMKEAEKISREEFDAKKILVISAVGTREYYQKLGYSLYGPYMSKTLN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttagatcctgtcttatccaaagcatgtaatgagattactcagaatttgcta
acaattcaagaaccaagtaaaaaacaggttaaagaagaaattataaaaatttgtacaaaa
tatgcattagagagaattccaagaaattatgagattctatctatggctaaagaatcagat
tttgataaattaaaaaaagtattacttagaaaacctgcaaagactgcatcaggagtatca
gtagttgcattgatgccaaaaccatatgcatgcccacatggtcgttgtacatattgtcca
ggaggaattgaatttaattctccaaatagttacacaggtaaagaaccatcatctcttaac
gcaattgaaaatgaatttgatcctaaattacaaattacatcaaagattgaaaaattaatt
gcatttgggcatgacccatcaaaaatggaaatcgtcattgtcggtggaacatttttgttc
atgccaaaagactatcaaaaagatttcatcaaatcatgttatgatgccctaaacgataca
gattcaaaagatttggaagaagcaaaatcaaacaatgaacatgcagcaataagaaatgta
ggatttacaattgaaacaaaaccagattattgtaaacaagaacatgttgatttaatgtta
agttatggaataacaagaattgaaatcggagttcagtcattacaagagagagtttacaaa
atagtaaacagaggacacaactataatgacgtagtagaatcatttcagatttcaaaagat
gcaggatacaaaattgttgcacatatgatgccagggctacccacaatgacgccagaagga
gacattgcagattttaagaaattattttcagatccccaattacgtccagacatgttgaaa
atttatccttcattagtaattgaaaatactccactgtatgaagaacacaaacaaggaaaa
tacataccatattcagatgaagatatgatcaaagttctaactgaagctaaaaaggacatt
ccaaaatgggtcagaatcatgagagttcagagagagatttcgccaaaagaaatcattgca
ggcccaaaatcagggaatttgagacaaatcgtgcaccaaaatcttgcaaaacagggacta
tcttgcaaatgtatcagatgtagagaggcagggctttcaaacaagaaaacagacggagga
gacgtaaaattaaacagaattaattatgattcctcaggaggaaaggaagttttcttgtca
tatgaggacaaaaacgaatcaatttatggatttttgagattaaggaaaccaagcattgat
gcacacagagatgaaattgatcaagacacatgtattgttagggaaattcacgtgtatgga
aaatcattaaagcttggagagaaaggtggagatgaaatacagcattcaggattaggaaag
aatttgatgaaagaagctgaaaaaatatccagagaagaatttgatgcaaagaaaatttta
gtaatcagtgcagttggcacaagagagtattatcaaaaattagggtattcgttatatggg
ccatacatgtccaagacattgaactag
DBGET
integrated database retrieval system
