Neobacillus cucumis: QNK12_01710
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Entry
QNK12_01710 CDS
T09078
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncm
Neobacillus cucumis
Pathway
ncm03420
Nucleotide excision repair
ncm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QNK12_01710 (pcrA)
03430 Mismatch repair
QNK12_01710 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_01710 (pcrA)
Enzymes [BR:
ncm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNK12_01710 (pcrA)
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNK12_01710 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QNK12_01710 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
WHY92263
LinkDB
All DBs
Position
323019..325259
Genome browser
AA seq
746 aa
AA seq
DB search
MQYLSEKLLNGLNPEQQSAVKCTDGPLLLMAGAGSGKTRVLTHRIAYLIVEKRVNPYNIL
AITFTNKAAREMKERIGKVMGGAAEEIWISTFHSMCVRILRRDIDRIGFNRNFTILDTTD
QQSVIKGILKDKNIDPKKFDPRAMLGAISSAKNELIDPEEYSKTAGGYFDQVVSDVYEEY
QKRLRKNQALDFDDLIMMTIQLFRRVPDVLEYYQRKFQYIHVDEYQDTNKAQYLLVKLLA
MRFKNLCVVGDSDQSIYRWRGADIANILSFEKDYPNATVILLEQNYRSTKRILLAANKVI
ENNLNRKAKNLWTENPEGNKLMYYRADSEQSEAQFVAGKIKELTRDGKHKLSEIAILYRT
NAQSRVMEEVLLKSNIEYSIVGGTKFYDRKEIKDMLAYLRLISNPDDDISLRRIINVPKR
GIGSSSVDKIADFAAMHDLSLYQALDSIELIGLSPKITKSAREFRDFIRNYTQMQEFLSV
TELVEEILEKSGYREMLKAEKSLEAQSRLENLDELLSVTKNFEEVSEDKSLVAFLTDLAL
VADIDSMDEEVEKADSIVLMTLHSAKGLEFPVVFLIGMEEGVFPHSRSLMEEAEMEEERR
LAYVGITRAEQSLFLTNAQMRTLFGRTNMNPASRFIKEIPEDLLEDAAPKAGKSSPFSSR
GGSFAGSGTGFGAPAARKPVMRPVAATTGGDQVGWKVGDKAEHGKWGIGTVVSVKGEGEG
TELDIAFPSPTGIKRLLAKFAPIKKA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatttatcagaaaagctattaaatggcttaaatccggaacagcaaagcgctgtg
aagtgtacagacggacctttattactaatggctggtgccgggagcggtaaaacaagagtg
ttaacacatcggattgcgtatttaattgtggaaaaaagggtgaatccatataacattttg
gcaatcacctttacgaataaagcggcaagagagatgaaagaaagaatcggaaaagtgatg
ggcggagctgcggaagaaatttggatttccacctttcactccatgtgcgtaagaatttta
cgccgagatattgaccggattggctttaatcgaaatttcacgattcttgacacaacggat
caacaatcggttattaaaggaattttaaaagataagaacattgacccgaaaaagtttgac
ccgagggcgatgctcggggcaatcagttctgccaaaaacgaattaattgatcctgaggaa
tattcaaaaacagcaggcggttactttgatcaggtcgttagtgatgtgtatgaagaatat
caaaaacgtttacgaaaaaatcaggcgcttgattttgatgatttaatcatgatgaccatt
caattgttccgtcgtgttccagacgttttagaatattatcagcggaaattccaatatatt
catgtcgacgagtatcaggacacgaacaaagcccagtatttattagtaaagctgctggcc
atgcgctttaaaaatctttgcgttgtcggtgattctgatcagtcgatttatagatggcgt
ggtgcggatattgcgaatatattatcttttgaaaaagattatccaaacgccaccgttatc
cttttagaacaaaactatcgctcgacgaaaagaatccttcttgcggcaaacaaagtgatt
gaaaacaatttgaatagaaaagcgaaaaacctttggacagaaaatccagagggaaataaa
cttatgtattaccgtgccgacagcgaacagagtgaggcacagtttgtagccggcaaaatt
aaagaattgacccgtgatggtaagcacaagctttcggaaattgctattctctatcggacg
aacgcacagtcccgtgtaatggaggaagttttgctgaaatcaaatattgagtatagcatt
gttggcggtacaaagttctatgacagaaaagaaatcaaggacatgttagcttatttacga
ctgatttcaaatcccgacgacgatattagcctgcggagaatcattaatgttccgaaacgc
ggtatcggatcaagctcagtcgataaaattgctgactttgcagcaatgcatgatctttca
ttataccaagcattagattcaattgaattaattggtttaagtcctaaaattacgaagtct
gcccgtgaattccgggattttattcgaaactatacgcaaatgcaggaattcctatccgta
acagaactagttgaagaaatccttgagaaatccggttatcgagagatgctaaaagcagaa
aaatcacttgaagcacaaagccgtctcgaaaacttggacgaattattatctgttacgaaa
aactttgaggaagtaagcgaggacaaaagccttgtcgcctttttaacggatttagccctt
gttgcggatattgattcaatggatgaagaagtggaaaaagcggattcgattgtgctcatg
accttacactcagcaaagggattggaatttccggttgtcttccttattggcatggaggaa
ggagtattcccgcacagccgttcccttatggaggaagcggaaatggaggaggagcgccgc
cttgcctacgtggggattacaagggcggaacaaagcctatttctgactaatgcacaaatg
cggacgctttttggtcgaacaaacatgaacccggcttcccgttttattaaggaaatccct
gaagatcttttggaggatgcggccccaaaggctgggaagagttctccatttagttcaaga
ggaggttcgtttgccggctccggtacaggatttggagccccagctgcgagaaaaccggtg
atgcggccagtggcagctacaaccggcggagatcaagttggctggaaggttggcgataaa
gccgaacacggtaagtggggaattggaacggttgtcagcgtgaagggcgaaggagaagga
actgaactcgatattgcttttcctagtccaacaggaatcaaacgtttgcttgccaaattt
gcgccgattaaaaaggcataa
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