Neobacillus cucumis: QNK12_06605
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Entry
QNK12_06605 CDS
T09078
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ncm
Neobacillus cucumis
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_06605 (addB)
Enzymes [BR:
ncm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNK12_06605 (addB)
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QNK12_06605 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Dpoe2NT
DUF7658
PduV-EutP
AAA_22
KIX
Motif
Other DBs
NCBI-ProteinID:
WHY93154
LinkDB
All DBs
Position
1344164..1347646
Genome browser
AA seq
1160 aa
AA seq
DB search
MSVRMIIGRSGSGKTSLCLNEIRDRLMEYPMGKPIIYIVPEQMTFLSEYHLARDPQIGGT
IRAQVYSFPRLAWRILQETGGISRYHLSNVGMSMLIRKIIEEQKEQLTLFERAADKQGFI
QQLEQMIIEFKRYCIRPEELIEGSVKLGNESAKALQDKLHDLEIIYKHFEDEVFGKYIDS
EDYFYLLSEKVASSRYLKEAEIYIDGFYSFTPQEYLVIKELMKNCRSVTIAMTTDQVSVH
GAPDELDLFRLSSDACHTIFEMARAEGIEVEEPILLKNQQKWNHPSLRHLEEMFDERPVV
PFEGPTAIHIGQAVSRRAEIEGIAREIRELVRTKGYRYRDIALLIRNGGDYHDLLVPVFD
DHQIPYFIDQKRTMLNHPLIEFLRSSLEVIQTYWRYEPIFRVIKTELLYPLQENPGKMRE
KMDRLENYCLAYGIKGSKWTKKERWSYRRSYGLELGTVQTDAEKEIEQELNELKLMVSAP
ILRLSRRLKKADTGRKLCEAIYLYLEELEVPAKLEKWKLAEEEQGNLVKMREHEQVWNAV
IDLLDQYVEILGDEPISLKAYTAILEAGFDSLRFSLIPPAIDQVLIGDLEKSRLTEIKVA
FVVGVNEGVLPAKLTDEGILADDDREMLMIAGIKVAPSSRTRLLDENFLAYKALTIPSDL
LYVTYPLANNEGKALIPSSYIKRIKDMFPGLVEHVFVNDPAELVEEDQLSFVSNPTSTLS
YLTAQLQLMKRNYPISPLWWNVYNFYMEGVGKAQAEKVLSSLFYTNQTVNLSKDVADELY
GETIQASVSRMELFNGCAFSHFAQHGLKLRERQIFRLEAPDIGELFHAALKHISDTVNEQ
KISWSNLTRQQCEVLSKEAVNTLAPKLQNEILLSSERHHYIKRKLEQIITRASLVLSEHA
KVSGFSPIGLELGFGSKGELPPLSFSLKNGKKMELAGRIDRVDQAKDENGSVFLRVIDYK
SSEKDVNLGEVYYGLALQMLTYLDIVITHSKELVEMEATPAGVLYFHVHNPFISTKKMLT
IDEIEQEIMKKFKMNGLMLSDQNVIRLMDQTLESGDSQIISAGIKKDGNLSKKSKVASIN
EFENLRHYVRNLYQKTGNSIIDGAVQIAPYKLKDKTPCTFCAFKSVCQFDEAIEDNRYRI
LAPHSKEDVLELIGKESNSE
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaagaatgattatcgggcggtctggaagcggaaaaacatcgctgtgtttaaac
gaaatacgggatcgcctaatggaatatccaatgggtaaaccaattatttacattgttccc
gagcaaatgacgtttttatcagagtatcatttagcaagagatccgcaaattggcggcacg
attcgagcccaggtttatagttttccacggctggcatggagaattttacaagaaacgggc
ggaatcagccgataccatttaagcaatgtcggtatgagtatgctgattcgtaaaatcatt
gaagaacaaaaggaacaattaactttgttcgagcgtgctgcagataaacaaggctttatt
caacaattagagcaaatgataattgaatttaagcggtattgtattcgacctgaagaacta
atcgaagggtcagtaaaactcggcaatgaatccgctaaggcacttcaagataaattacat
gatttggaaattatctataaacattttgaagatgaggtttttggaaaatacattgactct
gaagactatttttacctcctttcagaaaaagtggcatcttcccgatatctaaaggaagca
gaaatctatattgatggattttacagctttacaccacaggaatatcttgtcataaaggaa
ctcatgaagaattgccggagcgttaccattgcgatgacaacagatcaggtatctgttcat
ggagcacctgatgaacttgatttattcaggctgtcttctgatgcttgtcacactattttt
gaaatggcgagagcggaagggatagaggtggaagagccgattctgctaaaaaaccaacaa
aagtggaatcatccttctttacgccatcttgaggaaatgttcgatgagaggcctgttgtg
ccttttgaagggccaactgcgattcatattggtcaagcagtcagcaggcgagccgaaata
gaagggattgcgagagaaatacgtgaattggtccggacgaaagggtaccgctaccgcgat
atagccttactgatccgtaacggaggggattatcatgatcttttggtcccagtctttgat
gaccatcaaattccttattttatcgaccaaaaaagaacgatgttaaaccatcctcttatc
gaattccttcgttccagcctggaggttattcaaacgtattggcgctatgagccaatattt
agggtaattaaaacggaattgctttacccgcttcaggagaatcccggtaaaatgcgtgaa
aaaatggaccgactcgaaaactattgcctagcttacggtataaaaggaagtaagtggacg
aaaaaagagcggtggagttaccgccgttcctacggtttggagttagggacagttcaaacg
gatgctgaaaaggaaattgaacaggaattaaatgaattgaaacttatggtatctgcccct
atcttacgattatctagacgtttgaaaaaagcagatactggacggaagctttgtgaagcc
atttacttatatttagaagaattagaggtacctgcaaagcttgaaaagtggaaattggct
gaggaggagcaaggcaatcttgttaaaatgcgggaacatgaacaggtctggaatgcagtg
atagaccttttagaccaatacgtagaaatcctaggggacgaaccgatttcattaaaagcg
tatacggctattttagaagcaggatttgactccctgcgtttttctcttattcctccggca
attgaccaagttttaattggagacttggagaaatcaagattaacagaaatcaaggtcgca
ttcgtggtcggtgttaatgaaggggtattgcctgcaaaactaacggatgaagggatactg
gcagatgatgaccgagaaatgctgatgattgccggtatcaaggttgcaccaagcagcagg
acacgccttcttgatgaaaactttttagcctataaagcactgacaatcccgtcagatttg
ctttatgttacctatccgcttgctaataatgagggaaaagcactcattccttcctcttat
attaaaagaataaaagatatgttcccaggattagttgaacatgtatttgtaaacgaccca
gcggagctggtggaggaagatcagctcagctttgtttcaaatccaacatcaacactgtct
tatttaacagctcagcttcaattaatgaagagaaattatccgatttcgcctctttggtgg
aacgtatataacttttatatggaaggcgtgggcaaagcccaggctgaaaaagttttatcc
agccttttttacacgaaccaaacggtaaacctttcaaaggatgtagcagatgaattatac
ggagagaccattcaggcaagtgtttcgagaatggaattattcaatggctgtgctttttct
cattttgcccagcacggtctcaaactaagggaacgacaaattttccggttagaagcacct
gatataggggaattattccatgcggcattaaagcatatatcagatactgtaaatgaacaa
aagatttcttggagtaatttaacaaggcagcaatgtgaggttttatcaaaggaagcggtt
aatactctagctcctaaactgcaaaatgaaattttactgagctctgaacgccatcattat
attaaaagaaaattggagcaaattattacccgtgcctcgctagttttaagtgaacatgcc
aaggttagcggcttttcaccgattggcttagagttagggtttggctcaaaaggagaactt
cctccattaagtttttctttgaaaaatggaaagaaaatggagttggcaggccggattgac
cgtgtggatcaagcaaaagatgaaaacggaagtgtctttttgcgggtaattgactacaaa
tcaagtgaaaaagatgttaatttaggcgaagtttattatgggcttgcattgcaaatgctg
acctatctcgatatcgttattacccattcaaaagagctggtagaaatggaagcgactcct
gcgggtgttctttatttccatgttcacaacccgtttattagtacgaaaaaaatgttaacc
atcgatgaaatcgaacaggaaattatgaaaaagtttaaaatgaacgggttaatgctgagt
gatcaaaatgtcattcgtttgatggaccaaacacttgaatccggtgattcacaaattatt
tctgcgggaatcaaaaaggacggaaatttatctaaaaagtccaaagtagccagcataaat
gaatttgagaatttacggcattacgttcgaaatctctatcaaaaaacgggaaattcgatt
atcgatggggcggttcagatcgcaccatataagctaaaagataaaacaccctgtacattt
tgtgcctttaaatcagtttgtcaatttgacgaagcaattgaagataacaggtaccggatt
ctagctccgcactcgaaagaggatgttcttgagttgattggaaaggagagtaactcagaa
tga
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