Neobacillus cucumis: QNK12_07025
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Entry
QNK12_07025 CDS
T09078
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ncm
Neobacillus cucumis
Pathway
ncm03420
Nucleotide excision repair
ncm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QNK12_07025
03430 Mismatch repair
QNK12_07025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_07025
Enzymes [BR:
ncm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNK12_07025
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNK12_07025
MMR (mismatch excision repair)
Other MMR factors
QNK12_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
CoiA
Motif
Other DBs
NCBI-ProteinID:
WHY93233
LinkDB
All DBs
Position
complement(1425416..1427722)
Genome browser
AA seq
768 aa
AA seq
DB search
MKTVRYQNQTIILDQLDRDEYQKIYLAGKNGELVCPVCRESVRLILGIQESPHFSHTHST
IPDCPEPAVQERNEETNQSHKEVDGFRLPKGRTILETPKSVQVFKTAKVLEPQAPFQKNA
ANLIEYQSPYLQQLSKSDVVLDEAQAAAVSETDGALLVLAGAGSGKTRVLTVRTAFMLDV
KKIDPRNIMLVTFTSKAASEMKSRLLSYPKMKREAINKLVTGTFHSIFYRILMFHSRDKW
TSDRLLKKDWQRDKILKEAGKEIELSEKEFAYDLALQQIGFWKNSLLFPNDIRPASEWEE
KTLFLYKKYEEFKEREQLFDFDDMLIGCYQLLSSTPDLLEQYQNRFQYFLIDEFQDINKV
QYELIKLLAGKHKNVCAVGDDDQAIYSFRGSDPSYLLEFEKDFPYAKVITLEENYRSSHE
IVTVANQMIAANKVRRLKKMKAQYSTGAAPTLFFPNDEEEEATMIVTDLQEKITQGANPS
DFAILYRTNAGARAVFERLASSNLPFRIEQDVEAFYDRRIVRSILSFLRLSLSEDDQSAL
SDVLPFLFLKQSVIRDLKAMSILQDCSNLEALSYYKTAHAFQEKKLKKAVSSIRTLKQLA
PITAIEMIEKDIGFLDFLKKRGNESNMLEKGSDDIKDLKVAAKNFSTIEDLLAHAEHMSA
MNKEIKNLSKHFTEAITLSTIHRAKGLEYQTVYVLGAVDGSLPHDFALESYRNGDYSALE
EERRLFYVAMTRAKEQLYIAVPSNRRGKKANRSRFLAPLMKRRQRPTS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtgcgataccaaaaccaaacaattatactcgatcaattagaccgggatgaa
tatcaaaaaatatatttagcgggaaaaaacggtgagttagtttgtcccgtttgccgcgag
agtgttcgcttaattcttggcattcaggaatcacctcatttttcgcatacacattcaacc
attccggattgcccggaaccagccgttcaggaaagaaatgaagaaaccaaccaaagccat
aaagaagtggatggcttccgccttccaaaaggcagaacgattctagagacacctaaatcc
gtccaagtctttaaaacagcaaaagtccttgaaccacaggctccctttcagaaaaacgca
gcaaacttgatagaataccaatcaccttacttacaacagttatcaaaatcggatgtggtt
cttgatgaggcacaggcagcagcagtctctgaaacagacggggcattattagttcttgcc
ggcgccgggagtggtaaaacaagggtgttaacagtgagaacagcctttatgttagatgtc
aaaaagattgacccgcgaaacatcatgctggttaccttcacatccaaagccgcaagtgaa
atgaaaagccgcttactttcctatccgaaaatgaaaagagaagccataaataaactcgtt
accggtaccttccacagcattttttatcgaattcttatgttccattccagggataaatgg
acctcagaccgccttttaaagaaagattggcagcgggataaaattcttaaggaggccgga
aaagagatagaattgtcggaaaaagagtttgcctatgatttagcccttcagcaaatcggc
ttttggaaaaactcacttctttttccaaatgatataagacctgcatcggaatgggaagaa
aagacgcttttcctttataaaaaatatgaggaatttaaggaaagggaacaattatttgat
tttgatgatatgctcattggctgttatcagctgttaagctcgacacctgatttgcttgaa
caatatcaaaatcggttccagtatttccttattgatgaatttcaagatatcaacaaggtc
caatacgaactaattaaattgctagcgggcaaacataaaaatgtctgtgctgtcggagat
gacgatcaggcgatttattcgtttagaggcagtgaccctagttatttacttgaatttgaa
aaagattttccttatgcaaaagtgataacccttgaggaaaattatcgctcttcacatgaa
attgttacagttgccaatcaaatgattgccgctaataaagtaagaagactgaagaaaatg
aaagcccaatactcaactggagcagctcccactttattttttcctaacgatgaagaggaa
gaggcaacgatgattgtaacagacttacaggaaaaaatcacacagggtgcgaacccttcc
gattttgcgatcctttaccggacgaacgcaggggcacgggccgtgtttgaacggttagct
agttcaaatcttccgtttcgaatcgaacaggatgtcgaggctttttacgaccggaggatt
gttagaagtattctctcctttttaagattaagcttgagtgaggacgaccaatctgccctg
tctgatgtattgccctttttgttcttaaaacaatcggttataagggacttaaaagcaatg
agtatcctccaggattgcagtaatttagaggctttatcctattataaaacggcacatgcc
tttcaggaaaaaaaattaaaaaaagcggtctcctcaatccggacattaaagcaattggcc
ccgattacggccattgaaatgattgaaaaggatattggctttttggattttctaaagaag
cggggaaatgaatcaaatatgttggagaaaggttcggatgatattaaggacctgaaagta
gcagcgaaaaattttagtacgattgaagacttgttggctcatgcagagcatatgtctgcg
atgaataaggaaatcaaaaatttaagtaagcattttactgaggccattaccttaagtacg
attcatcgggcaaagggactcgagtatcaaaccgtttatgttcttggtgctgtggatgga
agcctgccgcatgactttgcgttagaaagctatcggaacggtgactattcggcattggaa
gaagaaagaagattattttacgttgcgatgacacgtgcaaaggaacagctttacatcgct
gttccaagtaaccgtagaggaaaaaaagccaatcgctcacgttttttggcaccattaatg
aaaagaagacaaaggcccacttcctaa
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