Neobacillus cucumis: QNK12_08835
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Entry
QNK12_08835 CDS
T09078
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ncm
Neobacillus cucumis
Pathway
ncm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QNK12_08835 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_08835 (priA)
Enzymes [BR:
ncm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNK12_08835 (priA)
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNK12_08835 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
ATPase_2
PIF1
ADDB_N
Zn_ribbon_6
AAA_16
nSTAND_NTPase5
AAA_19
Flavi_DEAD
T2SSE
SLFN-g3_helicase
DAP3
Kinesin
AAA_30
RecA_N
Motif
Other DBs
NCBI-ProteinID:
WHY93548
LinkDB
All DBs
Position
1782861..1785272
Genome browser
AA seq
803 aa
AA seq
DB search
MKIASVIVDVPTKQTDKPFDYLIPDQWKDTIQPGMRVIVPFGPRKIQGFVTELKNQSEFK
QLREICEPMDLEPVLNKELLELGNWLTEHTLCFKIFAYQAMLPAALKAKYQKKVKLASGT
MLNDLPEPLPSFFHQDGTIHWDEALKSGIVPKLQREAAKGHLEVIYEVKGKLKKKQIKMI
RPLLPLPELTAEMEQIPARAAKQKEVLRYFIENYREIELKQLLDDLHTTKSTINALIEKQ
ILFERDAEVYRDPFEHRTFERTFSLPLTEHQQKAIEPILNSINEKQHEVFLLYGVTGSGK
TEIYLQSIQDCLEKGKEAIVLVPEIALTPQMVNRFKGRFGNLVAVMHSGLSAGEKYDEWR
KILRREVSVVVGARSAIFAPFENLGIIIIDEEHETSYKQEDMPRYHARDVAIKRAETYNC
PVVLGSATPSLESFARAQKRVYKLLSLPSRMNNQALPSVEIIDMREELREGNRSMFSRNL
FDKLKDRIEKKQQSVLFLNKRGHSSFVMCRDCGYVINCPNCDISLTYHRASEQMKCHYCG
YESYVPKQCPECLSEHIRYFGTGTQKVEAELGKILPEARIIRMDVDTTGRKGSHEKLLQE
FQDGKADILLGTQMIAKGLDFPNITLVGVLSADTMLHLPDFRSSEKTFQLLTQVSGRAGR
HQLPGEVIIQTYTPEHYSVELAGTQDYDLFYNREMMVRKVHHYPPFYYLTLITVSHEQLM
TVVSVTEKIAGYVRSRVSNETVVLGPTASPIPRINNRYRYQCLIKYKRERDLSKTLKTIL
DQYQKDMAHGLQVSIDLNPFILM
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctagtgttattgtcgatgtcccgacaaaacaaaccgataagccttttgat
tatttaattccggaccaatggaaggatacgatacagccgggaatgagggtaatcgttcct
tttggtcccagaaagattcaagggtttgtaacggagctgaagaaccaatcagaatttaaa
cagttgagagaaatatgtgagccgatggaccttgaaccggttttaaataaagaattactg
gagctaggaaactggctgacggaacacactctttgttttaagatttttgcttatcaagcg
atgctgcctgcagctttaaaagcaaaatatcagaaaaaagtaaaacttgccagcggcacc
atgcttaatgatttaccggagccccttccgtcattctttcatcaagacggaaccattcat
tgggacgaggcattaaagtccgggattgtacctaagctccagcgggaagcggctaaaggc
catcttgaggtgatctatgaggtaaagggaaaactcaaaaaaaaacaaattaaaatgatt
cggccattgctacctctaccggaattaacagctgaaatggaacaaataccggcaagagcc
gcgaaacaaaaggaagtactcaggtattttatcgaaaactatcgtgaaattgaactaaaa
caattattagatgacttacataccactaagagtacaattaatgcattaattgaaaaacaa
attctttttgaaagggatgcagaagtttatcgggacccgtttgagcatcgaacatttgaa
cggactttcagcttaccgttaactgagcaccagcagaaagctattgagccgattttaaat
tctattaatgaaaaacagcatgaggtttttttactttatggggttaccggtagtggtaaa
acggaaatctatttgcaatcgattcaggattgccttgaaaagggaaaagaagcgattgtg
cttgtccctgaaatagcgctcactccgcaaatggtaaatcgcttcaaaggaaggtttgga
aatcttgttgcggtcatgcacagcggattgtcggccggagaaaaatacgatgaatggcgg
aaaattttacgccgagaagtgagtgtggtggttggagcacggtcagccatttttgctcct
tttgaaaacctgggaattattattatcgatgaggaacatgaaacaagttataagcaggag
gacatgccgcgttatcatgcacgtgatgttgccattaaacgcgcggaaacctataattgt
ccggtcgtgcttggaagtgctaccccctcgctggaatcatttgcaagggctcagaaaagg
gtgtataagcttttgtcacttccaagcaggatgaataatcaagcccttccatcagtggaa
atcattgatatgcgtgaagaattgcgggaaggaaatcgttccatgttttcacgaaactta
ttcgataagttgaaggaccgtatagaaaaaaagcagcaatcagttttatttttaaataaa
cgcggacattcgtcgtttgtgatgtgccgggattgcggttatgtaattaattgtccaaat
tgcgatatatccttaacctaccatcgcgcaagtgaacaaatgaaatgccactattgtggg
tatgaaagctatgtaccgaagcaatgcccagaatgcttaagtgaacatatccggtatttt
gggacaggtacacagaaagtggaggcagaactcggaaaaattttacctgaggcaagaatt
attcgtatggatgtagacacgactggccgaaaagggtcacatgaaaaacttttacaagag
tttcaggatggtaaagccgatattcttttagggacgcaaatgatagcaaaaggacttgat
tttcccaacatcacacttgttggggtcctttcagccgatacgatgcttcatcttcccgat
tttcgatcctctgaaaaaacctttcaattattaacacaagttagcgggagagcaggtcgg
caccaattaccgggagaggtaattattcaaacctataccccggagcattatagtgttgag
cttgcaggtactcaggattatgaccttttttacaacagagaaatgatggttcgaaaagtc
catcactacccgccattttactatttaacccttattaccgtcagtcatgagcagttgatg
acagtcgtttcagtaacggagaaaattgcaggttatgtccgctcgagggtatcgaatgaa
acggttgttttaggaccaacagcctcgcctattccccgtattaataatagatatcgctat
caatgtttgataaaatacaagcgggagagagacctttccaaaacgctaaaaacaattctt
gatcaatatcaaaaagatatggcccatgggttacaagtctcaattgatttaaatccgttt
attttgatgtag
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