Neobacillus cucumis: QNK12_09520
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Entry
QNK12_09520 CDS
T09078
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ncm
Neobacillus cucumis
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncm03000
]
QNK12_09520
Transcription factors [BR:
ncm03000
]
Prokaryotic type
Helix-turn-helix
Other families
QNK12_09520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
PAS
PAS_9
AAA_5
HTH_8
PAS_4
Mg_chelatase
AAA_2
AAA
HTH_50
HTH_23
HTH_28
AAA_7
HTH_1
MCM
Mga
HTH_30
DUF5417
HTH_29
AAA_3
RWP-RK
PAS_7
DUF3670
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WHY94907
LinkDB
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Position
1932035..1933939
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AA seq
634 aa
AA seq
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MEGVLQEDLDPMIKRSWLRSKQFNVNPFQTIGNEKLSGRELQTLLAEKKELIQISLPLMN
TLYSLVKGSGFLVTLCNENGYLLTVIGDPEPLENAERIQFVTGANWSEEAMGTNAIGTAI
LEMKPIQIFSYQHYTRATQSWTCSASPIFDSNNNIIGVLNISGPFDKVHPHTLGMIVSTV
KAIEFELQLIEKTNRNEMMMSYLEETTNTLSDGIIIINESGTVIKTNKIMRQILNLSEKE
IEGKWISNVIENKEMASFFQTNQEVMDREVKLQICKTQNQISVLFNAKPIHRQGMNIGSL
ITVKEIKKVRQLVNHFSGNQAKVTFEDIIGKNERFLQCLLEAKLAAKNESTVLLMGESGT
GKDLMAQGIHNESSRRKSPFIAINCGGIPRDLLGSELFGYAEGAFTGARKGGHAGKFELA
DGGTLFLDEIGEMSLEMQVLLLRVLQTREVVRIGGSRVVPVNVRIIAATNKDLWKEVQKG
SFRDDLFFRLNVMPIQMPSLRDRKDDIPLLVQHFSSQLAFRMQRKSPAINDHVLHLLKAY
DWPGNVRELHNIIERAMVKASDDKLTTELFPEEISAYGTLKDENPSRLPKKDERKRQALL
ESIKKYNRNFSKAAADLGISRSTLYRQMKKYNIE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagggggtcctccaagaggatctggatccaatgatcaaacgctcttggttgcgatca
aaacagtttaatgtgaatccttttcaaacaatcggaaatgaaaagctatcagggcgagag
ttacaaactttactagcagaaaaaaaggaattaatccaaatttcacttccactcatgaac
acactttactcgcttgtaaaaggctccggatttcttgtaacactttgtaatgaaaacggt
tacctattaaccgtcataggcgatccggaaccactggaaaatgctgaaaggattcaattt
gttacaggagccaattggagtgaggaggcgatgggcacgaatgcgattggcacagctatc
cttgaaatgaagcctattcaaattttttcgtatcaacattatacacgagcaacccaatcg
tggacctgttcggcctctcccatttttgactcaaataataacataatcggagttttaaat
atttccggaccgttcgataaagtccatccccacacccttggaatgattgtttccactgta
aaagcaattgaatttgagctgcaattgattgagaaaacaaatcgaaatgaaatgatgatg
agctatcttgaggaaacaaccaacaccttaagtgatgggataatcatcattaatgaaagt
ggtacagtcattaagactaacaaaatcatgcgacagatattgaacttgtcagaaaaagaa
atagaaggaaaatggatttccaatgtcattgaaaataaggaaatggcaagcttttttcag
accaaccaagaagtaatggatcgggaggtcaaactacaaatttgcaaaacccaaaaccag
atttcggtcctatttaatgcaaaaccgattcatagacaagggatgaatattggttcccta
attactgtgaaggaaataaagaaagtccgacaactcgtgaaccatttttccgggaatcaa
gctaaagtaacgtttgaagatatcattggaaaaaatgaacgttttttgcagtgtttactg
gaggcaaagctagcagcaaaaaatgaatcgaccgttctgttaatgggggaaagcggtacg
ggcaaggatttaatggcacagggtattcacaatgaaagcagccggcgcaagtctccattt
atcgctatcaattgtggaggcataccgagagatttattaggaagcgagctttttgggtat
gctgaaggcgcttttacgggagcaagaaaaggcggtcatgccgggaaatttgagttagct
gacggagggaccttgtttttagatgaaattggtgaaatgtcattggaaatgcaagtcctg
cttttgcgggttttacagacgcgagaggtcgtccggattggtggttcaagagtggtgccg
gttaatgttcgtattattgcagcaacgaacaaagacctttggaaggaggtacagaaagga
agtttccgtgatgatttatttttccgcctaaatgttatgccgattcaaatgccaagcctt
cgggatcggaaggatgatattccattattagtccaacatttttccagccagctcgcattt
cgaatgcaaagaaaatcccctgcaattaatgatcatgttctccatttattaaaagcatat
gactggcctggcaatgttcgagaattacataatattattgaacgggcaatggtaaaagct
tctgacgataaattgactacggaattgttccctgaagaaatttccgcatatggaaccttg
aaagatgaaaatccgtcaagattaccaaaaaaggatgaacgaaaaaggcaggcattacta
gaatccattaaaaaatataatcgcaattttagtaaggccgcagcagatttaggtatatcc
cgtagtaccttatatcggcaaatgaaaaaatacaatattgagtaa
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