Neobacillus cucumis: QNK12_11015
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Entry
QNK12_11015 CDS
T09078
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ncm
Neobacillus cucumis
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_11015
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNK12_11015
Archaeal homologous recombinant proteins
QNK12_11015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
NPV_P10
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WHY93954
LinkDB
All DBs
Position
2221307..2224444
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPIKLTMQAFGPYAGSESIDFTELGNRTMFVISGKTGSGKTTIFDAISYAIYGKASGED
RNGPELRSQFAPDDLLTEVSLDFSLRNKRYSITRLPQQLKKKEKGDGYTQIGAKAELFMV
DETGEKKLIASKVSDVEEKIKEIMLIDSNQFRQILMIPQGEFRKLLTSDSKDKEVILQRL
FHTQVYKLVEEKLKNEAVELKKSVEDQIKARNEAIHRIQAVTNEELREYVETGSENDTII
LPLLLKEIAGMAEELEKLEQAVKEKTKEQDGRKAQLFEAEAILKQLETKEQLRIRKNELE
AKGDIFTGKEKQVEKARKAALLAKQEELCHRLKRQMDEAKDSVTAIQTEIEKLSALIQQS
ELKVQAELEREGERQAAQEEINRLVHMKEDVYSFATLDKEKRQVENQLKLKLEEQQKTEK
KLAQLEEQFKSLSLQKAEIEKGQISFAENKGQLDRLQSEIERLMKYETTLVLHQKAENNL
KVVKGRYENTSARYLDAKTHLESIENKWIHGQAALLAAKLHEGEACPVCGSEHHPSPAPF
HEDSIPNEQDLKAAKDQVTLLEKEKSKDESSYYERLSEEKRQREALDEILKDMHFYRADF
TENDLNVVKSEVTFEKDSLDRVQRNLGEQIKLLGQVQENLEKAETGKTAFQNALQQLANE
VMDLRVCFTAKNTDMKRMMKSIPENLRTEAEYEKALTGTKKLLESLLQQFEAAKQQLQAV
KERHSAESARLVDAEKILTAKAAELDTERAAFLNQLSMQGFEKWGDYSAAKLSDGEIQAI
EMEIRRYREDVRSVTDQFEQLQELLKDVKTPDVTAIREDLEKLVNKVDQLNRERTDFIMK
KRDNEEIYQRIVSLNEQMKVQEDRHKLIGQLADISSGKNTFRITFERFVLAAFLDDILRE
ANVRLRRMTSGRFHLSRKTDRSKGNVQSGLELLVFDQYTGQERHVKTLSGGESFKAALSL
ALGLADVVQNYAGGVSLETMFIDEGFGTLDPESLDQAIEALIDIQSSGRLVGIISHVPEL
KERIDARLEVIAGQTGSRTEFVFTN
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaataaaactaacgatgcaggcatttgggccatatgcgggttctgagtcgatt
gactttacggagcttggcaaccgaacgatgtttgtcatttcaggaaaaaccggttcgggt
aaaacaaccatttttgatgctatcagttatgcaatctatggaaaagcaagcggtgaagac
cgcaatggaccggaacttcgcagtcagtttgcaccggatgatttattgaccgaggtttca
cttgatttttcccttcgaaataaacggtattcgattacacgcttgccgcagcaattaaaa
aagaaagaaaaaggcgatggctatacgcaaataggtgcaaaagcggagttattcatggta
gatgaaaccggtgagaaaaagctgattgcgtctaaagtcagtgatgtggaggaaaaaatt
aaagaaatcatgctgattgacagcaatcaatttcgccagattttgatgattcctcaagga
gaattccgaaaactgttaacttctgatagtaaagataaagaagtcattttgcagcggctt
ttccatacacaggtctataaattggtcgaggaaaaacttaagaatgaagcggttgagctg
aaaaaatccgttgaagatcagatcaaagcgagaaatgaagcaattcaccgaatccaagct
gtaaccaatgaggagctacgggaatacgtggaaacgggaagtgagaatgacacgatcatc
ttgccgttattattgaaggaaattgccggaatggcggaagaacttgaaaaattggaacaa
gcagtgaaggaaaaaacaaaggaacaagacgggcggaaggcacagctatttgaggcagaa
gcgattctgaaacagcttgaaactaaggagcagctgcgtattcgaaaaaacgaactggaa
gcaaaaggagatatttttacaggcaaagaaaaacaagttgaaaaagcgcggaaggctgca
cttttagcaaaacaggaggagctttgtcatcgtttaaaacggcagatggatgaagcgaaa
gattcggttacagcgattcaaaccgaaattgaaaaattatctgcccttatccaacaaagt
gaactcaaggttcaggcagaactcgaacgggaaggggagcgtcaggctgcccaggaagaa
atcaatcgccttgttcacatgaaagaggatgtttattcctttgcaacactcgataaagag
aaaagacaagttgaaaaccagctgaaactgaagctggaagagcagcaaaaaacagaaaag
aaattagcgcaactagaagaacagttcaagtctctttctctgcaaaaagcggaaattgaa
aagggtcaaatttcctttgccgaaaataaaggtcaactggatcggcttcagtcagaaatt
gaacgcctcatgaaatatgaaacaacacttgtattacatcaaaaagccgaaaataatttg
aaggttgtaaaggggcgctatgaaaacacatctgctcgatatttagatgcaaagactcat
cttgaaagcatagagaataaatggattcatggtcaagctgcacttttggcagcaaagctt
catgagggagaagcctgtccagtttgtggttccgaacatcatccatcccctgcacctttt
catgaagattctattcctaatgaacaagatttaaaggcagctaaggatcaggtaactcta
ttagaaaaggaaaaatcaaaggatgaatccagttactacgaacgcctttcagaagaaaaa
agacaacgggaagcattggatgaaattctcaaggatatgcacttttaccgggccgatttt
acagagaatgatttaaatgttgtgaaatcggaggttacatttgaaaaagacagcttggat
cgggttcaaagaaaccttggtgaacaaataaaacttcttggacaggtgcaagagaatttg
gagaaagcggaaacgggaaaaacggcgttccagaatgctcttcaacaacttgccaatgag
gttatggatctaagggtttgttttacagcaaagaatactgatatgaaacgaatgatgaaa
agtattccagaaaaccttcgaacggaagctgagtatgaaaaggcacttacagggaccaag
aaacttcttgagtcattacttcaacagttcgaggctgctaaacaacaattacaagcagta
aaggaacgtcattccgctgaatctgcaagattagtagatgctgaaaaaattctcactgca
aaagcggctgaacttgatacagaacgtgcagcattcttaaatcagttatcaatgcaaggt
tttgaaaaatggggagattatagtgcagcgaaactatcagatggtgaaatccaagctatt
gaaatggaaatccgccggtaccgcgaggatgtaagatccgttaccgaccaatttgaacag
ttacaggagttattgaaggatgttaaaacacctgatgttactgctatacgagaggacctg
gaaaaattagtcaataaggtagaccaattgaatcgtgagcgtactgattttattatgaaa
aagcgtgataacgaagaaatatatcaacgtattgtcagtttgaatgaacaaatgaaggta
caggaagataggcataagctaattggccaacttgccgatatctctagcgggaaaaatact
ttcaggattacctttgaacgcttcgtgcttgccgccttcttagatgatattttgagagag
gcgaatgttcgattacgtaggatgacatcaggacggttccatctgagtcggaaaacggac
cgttcaaaagggaatgttcaaagtggattagagcttctagtctttgaccaatatactggc
caggagcgtcatgtaaaaacattatctggtggggaaagctttaaggccgcactttcatta
gcattgggactcgcagatgtcgttcaaaactacgctggcggggtttcattggaaacgatg
tttattgatgaagggttcggaactctcgaccctgaatcgctcgatcaggcaattgaagcg
ttgatcgatatccaaagcagcggccgtttggttggaatcatctcccatgtccctgagctt
aaagaacggattgatgccagactagaagttattgccggacaaacgggaagcaggacggag
tttgtgtttactaattag
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