Neobacillus cucumis: QNK12_19290
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Entry
QNK12_19290 CDS
T09078
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ncm
Neobacillus cucumis
Pathway
ncm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNK12_19290 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_19290 (mutM)
Enzymes [BR:
ncm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QNK12_19290 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QNK12_19290 (mutM)
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QNK12_19290 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
WHY89824
LinkDB
All DBs
Position
complement(3866623..3867432)
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AA seq
269 aa
AA seq
DB search
MPELPEMENYRRLLNQRIADHVITDVQINREKSINVKPELFINSVLHQKVTTVDRRAKHL
LFHLQNGQVLLLHLMLGGWMFFGTEEEKPKRTIQIRLSFGNQHLYFIGLRLGYLHLYSEK
AVQQELSDLGPEPLESSFTLEALLKLMDHKRGKIKAKLLDQVFIAGIGNCYSDEICYHSG
ILPTRDIQEIQEEEKSQLFHSMKNVLTDALNHGGYLENPFFIGDTKTGSYNQFCKVYDRE
KQPCFRCQTPIKKTTIASRKSFFCPVCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaaatggagaattaccgaagattattaaatcaacggattgctgat
catgtcattacagatgtgcaaattaaccgtgaaaaatcaattaatgtaaagccggagctt
tttataaacagtgtccttcaccaaaaggttacgacagttgaccggagagccaagcatttg
cttttccatcttcaaaatggacaagtcctgttattgcatttaatgctcggcggctggatg
ttcttcgggacggaggaggaaaaaccgaaacggacgattcaaattcgcctatcctttggg
aatcagcatttatatttcatcggattgcggcttggctacctacatctatacagtgagaaa
gccgtgcagcaagagttatctgatttaggtccagaaccactggaaagcagctttacttta
gaagcacttttgaaattaatggaccataagcgtggaaaaattaaggcgaagctgcttgac
caagtttttattgctgggattgggaattgctattcagatgaaatctgctatcattctgga
atattgccaacaagggatatccaagagatacaggaagaagagaaaagccaattgtttcat
tccatgaaaaatgtgctgaccgatgccctaaatcatgggggatatttagaaaatccattt
tttattggagatacaaagacagggagctataaccagttttgcaaggtttatgatcgtgaa
aaacagccttgctttcgctgtcaaacaccgatcaaaaaaacaaccattgcatcacgaaaa
tcctttttctgtcctgtttgtcaaaagtaa
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