Neobacillus cucumis: QNK12_23580
Help
Entry
QNK12_23580 CDS
T09078
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ncm
Neobacillus cucumis
Pathway
ncm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QNK12_23580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_23580
Enzymes [BR:
ncm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QNK12_23580
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNK12_23580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
nSTAND3
AAA_12
NTPase_1
AAA_16
UvrD_C
AAA_28
AAA
HHH_5
NPHP3_N
T2SSE
DEAD
TsaE
AAA_18
AAA_5
AAA_17
Motif
Other DBs
NCBI-ProteinID:
WHY90627
LinkDB
All DBs
Position
complement(4686829..4689243)
Genome browser
AA seq
804 aa
AA seq
DB search
MEKQDSLDLFAEQGKFVKGKHLVTIFHNEQNLYTVLRIRVEETNDQYEDKEAVVTGYFPK
IHEQETYIFYGEFKEHPKFGLQFHTNHFRKDIPQTEQGVITYLSSEMFKGIGKKTAENIV
KVLGENAISKILNQPSLLDSIPKLPPDKAKMLYDTLMEHQGLEQVMVALNQYGFGPQLSM
RIYQAYKEETLGIIQKNPYKLVEDIEGIGFGRADELGYQLGISGNHPDRIKAACLYTLEN
ESMQTGHVYIPAKDLLEKVKNLLEENKRDQIEFLDISNEVIKLEEEGKIIGEEQRVYLPS
LYFAEKGLVTNIDRILEQSEYKEQFPESEFLLALGSLEERLGVEYAPSQKEAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYAELHGCSLEPKDYQKKDEPFPFLLAAPTGRAAKRMSE
STGLPAVTIHRLLGFNGTEGFDRDETTPLEGKIIIVDETSMLDIWLANQLFKALPEHIQV
ILVGDEDQLPSVGPGQVLKDLLNSERIPTVRLTDIYRQAEGSSIIELAHDIKKGFIPANV
TVKQPDRSFIRCSTAQVAQVVEKVALNAKNKGYSAKDIQVLAPMYRGPAGIDRLNVLLQE
IFNPNPDGSRKEITFGDVKYRIGDKVLQLVNQPENNVFNGDIGEIISIIYAKENTEKQDM
IYISFEGHEVEYTKQDLTQITHAYCCSVHKSQGSEFPIVILPITRSYYRMLRRNLIYTAI
TRSKQSLILCGEEDALRMGVERADELSRLTTLCHKLQESIPANGSEIKMETQIPDGLTLE
EALMKVDPMIGMENLTPYDFMVNN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaggactcacttgatttatttgccgaacaaggaaagttcgtgaaggggaag
catcttgtaacgatttttcataatgagcaaaatctatacaccgtcctgagaattcgagtg
gaagaaaccaatgaccaatatgaggacaaagaagcagtggtaactggttattttccgaaa
attcacgaacaggaaacgtatattttttacggtgaatttaaggaacatccgaaatttggt
cttcaatttcacaccaatcatttccgaaaagatattcctcaaactgaacaaggtgttatt
acttatttatcaagtgaaatgtttaaagggattggcaaaaagacggcggagaatattgtt
aaagtattaggggaaaatgcaatttcaaaaatccttaatcagccgtcattgctcgactct
attccaaagctgcctcctgataaggcgaaaatgctttatgatacgttaatggaacatcag
ggacttgaacaagtcatggtcgccttaaatcaatatggctttggtccgcagctttcgatg
agaatatatcaagcttataaggaggaaaccctcgggattattcaaaaaaatccttataag
ctggtcgaagatattgaaggaatcggctttggccgggcagacgagctaggatatcagctt
ggcatttctggaaatcacccagaccgaatcaaagcagcttgcctttacacgcttgaaaat
gaaagcatgcagacaggacatgtatacatacctgcaaaagacttattagaaaaagtaaaa
aaccttctcgaagaaaacaaacgagatcaaattgaatttttggatatctcgaatgaagtc
attaagcttgaagaagaggggaaaataattggcgaagagcagcgtgtctatcttccctca
ttatattttgctgaaaagggcctcgtgaccaatattgatcgaatcttagagcaatccgag
tacaaagaacaatttccagaatcagagtttttacttgcacttggaagccttgaagaaaga
ctcggcgtggaatatgctccctcgcaaaaagaagcaatccaaacggccttaatgtccccg
atgctaattttaacaggcggtcccggcactggtaagacgaccgtcatcaaagggattgtc
gagctttatgccgaacttcatggctgctccttagaaccaaaggattatcaaaagaaagac
gaaccctttccttttttacttgccgcaccaacgggcagagccgcgaaaaggatgagcgag
tcgacaggtcttcctgccgttacaattcaccgtttacttggttttaatggaacagaaggt
tttgaccgtgatgaaacaacaccgcttgaaggaaaaattattatcgtagatgaaacgtcc
atgctcgatatttggctggcaaatcagttgtttaaggcacttccggagcatatacaagtc
attttagtcggagatgaagatcaattgccatctgtcggaccagggcaggttttaaaagat
ctattgaattcagaaagaattccgacggttagattaaccgatatctatcgtcaggcagaa
gggtcttctatcattgaacttgcacacgatattaaaaaggggtttataccggctaatgta
acagtcaaacaacctgatcgctcttttatccgctgttcaaccgcgcaggttgcgcaggtt
gtggaaaaagtcgcattaaatgcaaaaaacaaaggatattcggcaaaggatatccaggtg
ttggcaccgatgtaccgcggacccgcagggattgaccgcttaaatgttttactgcaggaa
atctttaatccaaacccggatggttcgcgtaaagaaattactttcggtgatgtaaaatat
cgaatcggtgacaaagtgcttcagttggtcaatcagccagaaaataatgtttttaacggt
gatattggcgaaattatttcgattatctatgcaaaagaaaataccgaaaaacaagatatg
atttacatttcctttgaggggcatgaggttgaatatacaaagcaggatttgacgcaaatt
actcatgcttattgctgttctgttcataagtcgcagggaagcgaatttccaattgtcatt
cttcctataacaagaagctactaccgaatgctgcggcggaatttaatttatacagcgatt
acccgcagtaaacaatcgttaatcctctgcggtgaagaagatgccttaagaatgggcgtc
gaacgggcggatgaattaagcagactaacgaccctttgccataagctgcaagaatccatc
cctgccaatggaagcgaaataaaaatggaaacacaaattcccgatgggctaacattagaa
gaggctttaatgaaggtcgatccaatgattggaatggaaaaccttacaccttatgatttt
atggttaataactga
DBGET
integrated database retrieval system
