Nostocales cyanobacterium HT-58-2: BZZ01_02095
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Entry
BZZ01_02095 CDS
T04905
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ncn
Nostocales cyanobacterium HT-58-2
Pathway
ncn03410
Base excision repair
ncn03430
Mismatch repair
ncn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BZZ01_02095
03430 Mismatch repair
BZZ01_02095
03440 Homologous recombination
BZZ01_02095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncn03400
]
BZZ01_02095
DNA repair and recombination proteins [BR:
ncn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BZZ01_02095
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BZZ01_02095
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BZZ01_02095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ARV57580
UniProt:
A0A1Y0RGC1
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All DBs
Position
507456..509795
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AA seq
779 aa
AA seq
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MPEQNQQWILATTEQPPEWFLQAVKQYAPVHGGSFAAQLLWQRGIRDVSQIEAFVNYKAY
QSTSPFEFGQEIHWAVERLQQARDAGEKVAIWGDFDADGITSTAVLWDGLGQFFAQNTQL
IYYIPNRITESHGLNCQGIEKLAKQGFELIVTCDTGSTNISEIIYAKQLGVDVIVTDHHT
LPPERPPVTAIINPRSLPQTHPLFHLSGVAVAYKLVEALYQTLPKVPQQLLEDLLDLVAV
GLIADLVQLSGDCRYLAQLGIGKLQEDFKKTPPQRRRPGVGRLLELCQKSGDRPTDISFG
LGPRINAVSRIQGDASFCVELLTSRDQKRVQELAEVTELANTRRKSLQKDVAQQVAQKLS
KMDLSTTSIIVLEDPQWAVGVLGLVAGQVAQETGRPTILLSSERVGEQESGGNSSPPLAR
GSARSVNSVDLYQLVKDQAHLLHRFGGHPYAAGLSLPVENIPLFTQAINQRLRQSLGGAT
LTPTLQADLAVTVADLGKELFLELKLLEPCGMGNPVPKLLIQNCWFENAWHRNQQDWQGK
KVQYIKAEFDIRDDSTRNPFPGVWWGHYKDELPPGRCDCIAELDYNTFKKRYEIRLIAVR
SCQNSQLTTHNLEFLLDWRNLPTPSLASSPTPLLLKECPTSWDNLRAWFKRSLHNQQPLA
LAWKKPDPKPPEQIWLTLVGIAKYLTRTNQPVTRVQLLEKLGIGDQALLFGLRALKYLGF
KITRQDRSLVFTQDAATESTLAEAAISQFLAAVREEQFQQQYFADVPLSTIEAIVHVSS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaaaaccaacagtggattctcgcgacaactgaacaacccccagaatggttt
cttcaagcggtgaagcagtatgcaccagttcatggtggatcttttgcagcgcagttgtta
tggcaacgaggtatacgcgatgtttcacaaatagaggcttttgtcaattataaagcttat
caatccacgagtccgtttgagtttgggcaagaaatacattgggcagtggaacggttgcaa
caagcacgagacgctggtgaaaaagttgccatctggggagattttgacgctgatggtatc
acttctactgctgtactatgggatggcttaggacaattttttgcccaaaacacgcagctc
atttattacattcctaatcgcattacagaatcccatggactgaactgtcaaggaattgag
aagttggcgaagcagggctttgagttaatagtcacttgcgatactggtagtacaaatatt
agtgaaattatttatgctaagcagctaggtgtagacgttatagtcacagaccatcatacc
ttgcctccagaacgtccgccagtgacagcaattattaacccccgctctttaccacagaca
catccactctttcatctatcaggagtggcggtagcatacaagttagtggaagctttgtat
caaactctaccaaaagtccctcaacaacttttagaagatttgttggatttagtggcggtt
ggacttattgctgatttggtgcagttgagtggagattgtcgctatttggcacaattggga
attgggaaactacaagaggattttaaaaagacacctccccaaaggcggcgtccaggagtc
gggcgattgttggaattatgccagaaaagtggcgatcgccccacagatatttccttcggt
ttgggtccccgaatcaacgctgttagtcgcattcaaggtgatgcttctttttgtgtagaa
ttactgacaagtcgcgatcaaaagcgtgttcaagaacttgcagaagtcacagaattagca
aacactcgccgcaaatctttacagaaagatgttgcccagcaagtggcgcaaaagctctcc
aaaatggacttatcaaccaccagcatcatcgttctggaagacccacaatgggctgttggt
gtcttggggttagttgctggacaagtcgcacaggagacaggacgaccaacgattcttttg
agttccgagagggtaggtgaacaagagagtgggggaaattcctcccctcctcttgcccgt
ggttctgctcgttcggtcaactctgttgatttataccagcttgtaaaagaccaagcacat
ttgttgcatcgatttggtggacatccctatgcagcaggattaagcctccctgtagagaat
attccattatttacacaggcaattaaccaaaggttgcgtcaatctttgggaggcgcaact
ctcacaccaaccttgcaggcagatttggctgtcacagtagcagacttgggcaaagagtta
tttttggaactcaaactcctagaaccttgtggaatggggaacccagttccgaaacttttg
attcaaaattgctggtttgaaaatgcttggcatcgcaatcagcaagattggcaggggaaa
aaggtacagtacataaaagctgagtttgacattcgggatgattcgacaagaaatcctttt
cctggtgtgtggtggggacactacaaggatgaattacctccaggaagatgtgattgcata
gctgaactagactacaataccttcaaaaaacgctatgaaattcgactcatagccgtccgt
tcctgtcaaaactcacaactgacaactcacaatttagaattcttactagactggcgtaac
ctccctactccttctctcgcctcgtctcccactccccttctcctcaaagagtgtccgacc
agttgggacaatttacgggcttggtttaagcgttctcttcacaaccaacaacctctggcg
ctggcttggaaaaaaccagatcccaaaccaccagaacaaatttggctcacccttgtagga
attgccaaatacctgactcgcacaaatcagcccgtgactcgtgtccagttgttggaaaaa
ctcggtataggagaccaagccttactttttgggttaagagctttgaaatatttaggtttc
aaaatcacacgccaagaccgttctttggttttcactcaagatgcagccacagaatcaact
cttgcagaggctgctatttcacaatttttagctgctgtacgtgaagaacagtttcagcaa
cagtactttgctgatgtccctttatcgacgattgaggcgatcgttcatgtttcatcataa
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