Nostocales cyanobacterium HT-58-2: BZZ01_13630
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Entry
BZZ01_13630 CDS
T04905
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ncn
Nostocales cyanobacterium HT-58-2
Brite
KEGG Orthology (KO) [BR:
ncn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncn03016
]
BZZ01_13630
Enzymes [BR:
ncn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BZZ01_13630
Transfer RNA biogenesis [BR:
ncn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BZZ01_13630
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ARV59530
UniProt:
A0A1Y0RLZ1
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All DBs
Position
3357069..3359129
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AA seq
686 aa
AA seq
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MEKGTLVEFRLGSDRRLGVVDRPDGKTRLFVVDERGQSHSLAPRQMTYVVTGQTYKPSSI
PEFLEEVKPYLDPSSLEVAWELLVESGEIVTPAQMANLLFSESEAAHCYAAYYLLSDDKI
YFKQKGEAYEPRSAAQVAERKHQLEVEALKAKGQQEFLARVEQALKGESVEWQRYDRHRL
EAIEKYAALLADVVRVGLSYDSLARAYPPPALVLETMNMLGRPATPQGAFQLLVDLGWWS
PHENIFLRRSSIPVQFASKVLEVAQQRLESHPPDQDINRLDLTHLKVYTIDDESTTEIDD
GLSWELLADGKERLWVHIADPTRWLMPEDELDLDARKRGSTVYLPTGMVPMFPEVLATGP
MSLVQGKMCCALSFGIVLDETGAVEDYSIYPSIIKPTYRLTYEDVDEMLDLGVQAESEIA
AIASWAQRRKAWRYAQGAISINMPEAMIKVKGDDISIDLLEDSTARQLVAEMMIVAGEVA
ARYGQKHNIPLPFRGQPQPELPPEQELLQLPAGFVRACAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVLPFSAEELKEVMMTVSSITQEVTMVERQT
NRYWALEYLRRQPDEIWEATVLMWLREDSGLALILLEDLGLQLPMLFKRSVKLGEQVLVK
VFHADPHKDVIQFQEIIYQEAQPAAN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttcgacttggtagcgatcgccgtttgggtgtagta
gaccgtccagacggcaaaactcgtttgtttgtggtagatgaacggggtcaatctcatagt
ctcgcacctcggcaaatgacctacgtagtcacagggcaaacatacaagccttcgtcaata
ccagaatttctggaggaagtcaagccttatctagacccctccagtttagaggtagcttgg
gaactcctggtagaaagtggagagatagtcacgccagcccaaatggcaaatcttctgttt
tcagaatcagaagctgctcattgctacgccgcgtattatctgttatcagatgataaaatt
tatttcaaacaaaagggagaagcttacgaaccgcgaagtgctgctcaagttgcagaacgg
aaacaccaactagaggtagaggcgctaaaagcaaaaggacaacaggaatttctggctaga
gtagagcaggcactcaaaggtgaatcagtagagtggcaacgctatgatcgccaccgctta
gaagccatagaaaaatacgcagcgctgctagccgatgttgtccgagtggggttaagttat
gactctctcgcccgtgcctatcctccaccagcattagtcttggaaacaatgaatatgttg
ggacgccccgcaactccccaaggagcctttcaactgttagtagacttaggttggtggagt
ccgcatgagaacatatttctgcgtcgttcgtcaatccccgtacagttcgctagcaaggta
ttagaagtggcgcaacagcgattggaatcacatccgccagatcaagatatcaaccgcctg
gatttgactcatctgaaggtgtatacaatcgatgatgaaagtactaccgagatagatgat
ggtctaagttgggaattacttgccgatggcaaagagcggttgtgggtgcatattgctgat
cctacgcgctggttaatgccagaagatgaattggatttagacgcgagaaagcgaggcagc
actgtttatttgcccacagggatggttcctatgttccctgaagttttggcaacaggacca
atgagtttggtgcagggaaaaatgtgttgcgccctaagttttgggattgttttagatgag
actggggcagtagaagattatagtatttatccaagtattattaaaccaacatatcgccta
acctacgaagatgtcgatgaaatgttggatttgggcgtacaggcggaatcagaaattgca
gcgatcgcgagttgggcacaacgacgtaaagcttggcggtatgcccaaggagcaatcagc
atcaatatgccagaggcgatgatcaaagtcaaaggcgacgacatcagtattgatctatta
gaagactccacagcacggcaattagtcgccgagatgatgattgttgctggtgaagttgct
gctcgctacggtcaaaagcataacattcccttgcccttccgtggtcagccacagccagaa
ttacctccagagcaggaattattgcagctaccagcagggtttgtccgcgcgtgcgctatg
aggcgttgtatgcccaagagcgaaatgagcattactcctgtgcgtcatgctggtttaggt
ttggatacttatacccaagcgacttcccccatccgtcgctatagtgatttgctgactcac
tttcaactgaaagctcatctgcgtggtgaagtattgcccttctcggcagaagaattaaaa
gaagtcatgatgaccgtctcttcaatcactcaagaagtgacaatggtagaacggcaaaca
aatagatattgggctttagagtatttacgccgtcaacctgatgagatttgggaagcaaca
gtgctgatgtggttgagagaagacagtggtctagcactcattttgttagaagatttaggc
ttgcagttgccaatgttatttaaacgttctgtgaaacttggtgaacaggttttagtcaaa
gtctttcatgctgatccacacaaagatgtgattcagtttcaggaaattatttatcaagaa
gcgcaaccagccgccaattaa
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