Nostocales cyanobacterium HT-58-2: BZZ01_18540
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Entry
BZZ01_18540 CDS
T04905
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
ncn
Nostocales cyanobacterium HT-58-2
Brite
KEGG Orthology (KO) [BR:
ncn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BZZ01_18540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncn03021
]
BZZ01_18540
Transcription machinery [BR:
ncn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZZ01_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
PIN_4
Motif
Other DBs
NCBI-ProteinID:
ARV60359
LinkDB
All DBs
Position
complement(4582721..4583890)
Genome browser
AA seq
389 aa
AA seq
DB search
MYQTEQQSLKETMNIADLGTMETMGSAADNEELFNTLDAVADEDPPIVIENLEAEDRIGD
QMAAARPSGYNKTEYDDAVGAFFKEMARYPLLKPDEEVELARRVRFLEEIRELQVSLLEE
LGNQPNKAAVASHLGMTEKQLEHKLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDL
IQEGAMGLNRATEKFDPDKGYKFSTYAYWWIRQAITRAIANDARTIRLPIHIVEKLNKLK
KAQRELKQRLGRNPTEEEMAEALEIPAQQLRQLQQLRRQALSLNHRVGKEEDTELMDLLE
DEDNQSPEAKMNESMMRQEIWEVLGDVLTPREKDVISLRYGLITSEPCTLEEVGTMFNLS
RERVRQIQSKAMRKLRRPHIAKRLKGWLV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaacagagcaacaatccctgaaggaaactatgaatattgctgacttgggaaca
atggaaacaatgggaagtgctgctgataatgaagaattatttaatacattagatgcagtg
gcagatgaagatcccccaatagttatagaaaacttggaagccgaagatcgtatcggtgat
caaatggcggcggcgcgtccctcgggatacaacaaaaccgagtatgacgatgctgtgggt
gccttttttaaagaaatggctcgttatccgttgctaaagccagatgaagaggtcgaatta
gcgcggagagtgcgatttttagaggaaattagagaattacaagtttccttacttgaagaa
ctaggaaatcaaccaaacaaagcagctgtagcttcccatcttgggatgaccgaaaaacaa
ctagaacataaattgtatcaagggcgagtcgcaaaacgtaaaatgattcgctcaaaccta
cgattggttgtatctattgctaaacgatatttaaatcgcggagttccttttctagattta
attcaagaaggagcaatggggttaaatcgtgctacagaaaaatttgacccagataaagga
tacaagttttctacttacgcttattggtggattagacaagcaattacgcgagctatagcc
aacgatgcgcgtactattcgcttaccaattcacatagttgagaaacttaacaaacttaaa
aaagcgcaacgggaactcaaacagagactaggacgcaatccaactgaagaagaaatggcg
gaagctctagagattcccgcgcaacaactacgccaactgcaacaactacgacgccaagca
ctttccctcaatcaccgtgttggtaaagaagaagatacagaattgatggatttgctagaa
gatgaagataaccaatctccagaggcgaaaatgaacgaaagtatgatgcgccaggagatt
tgggaagtcttaggagacgtgctcacgccacgggaaaaagacgtcatttctctgcgctac
ggtttgattaccagtgagccctgtaccttagaagaagttggtacaatgttcaacctttcc
cgcgagcgagttcgacaaattcaaagcaaagcgatgcggaagttgcggcgtcctcacata
gccaaacgcttaaagggttggttggtatag
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