Nostocales cyanobacterium HT-58-2: BZZ01_24955
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Entry
BZZ01_24955 CDS
T04905
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ncn
Nostocales cyanobacterium HT-58-2
Pathway
ncn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BZZ01_24955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncn03021
]
BZZ01_24955
03400 DNA repair and recombination proteins [BR:
ncn03400
]
BZZ01_24955
Enzymes [BR:
ncn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BZZ01_24955
Transcription machinery [BR:
ncn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BZZ01_24955
DNA repair and recombination proteins [BR:
ncn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BZZ01_24955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
ARV61442
UniProt:
A0A1Y0RNL1
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All DBs
Position
6042130..6044007
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AA seq
625 aa
AA seq
DB search
MRAAQNNQFDYVKIGLASPERIRIWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNSYVVLSPGNAETLTYKQLLSEDQWLEIEDQIYSEDST
LQGVEVGIGAEALLRLLADINLEQEAESLREEITNAKGQKRAKLIKRLRVIDNFIATGSK
PEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLNIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRSDPSVWDVLE
EVIEGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGRPIITPSQDMVLGAYYLTAENPHATKGAGRYFASLDD
VVMAYEQQQIDLHAYIYVRFDGEVESGEPDTEPVEVIPNDDGSRTLMYKFRRIREDAQGN
LVSQYIRTTPGRVIYNKAIQEALAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagcccaaaataatcagtttgattacgttaaaatcggtttggcatcaccagaa
cgtattcggatctggggtgagagaactttacccaatggtcaagtcgttggtgaagtcaca
aagccagagacgataaattaccgtactttaaaaccggaaatggatggcttgttctgcgag
cgcatctttggtccggctaaagattgggaatgccattgcggcaagtataagagagtgcgt
cacagaggaattgtgtgcgagcgttgtggcgtggaagttaccgaatcgagagtgcgccgc
catcgcatgggctacattaaactcgccgcaccagtcgctcacgtttggtatctcaagggc
attcccagctatatctccatcctgttagatatgcccttgcgggatgtagagcaaattgtc
tatttcaattcctatgttgttcttagtcctggtaatgctgaaacattaacttacaagcag
ctcctaagtgaagaccagtggctagaaattgaagaccaaatttatagcgaagattctaca
ctgcaaggagtagaggtcggtattggtgcagaagctttgttgcggttactggctgatatc
aatctagaacaagaagctgaatccttgcgggaagaaattaccaacgccaaaggtcaaaag
cgggcgaagctcattaagcgactgcgggttattgacaacttcatcgctaccggatctaaa
cccgaatggatggtcatgacagtgattcctgtcattcccccagatttacgaccaatggtg
cagttggacggtggacgattcgccacgagcgatttgaacgatttgtatcgccgggtgatt
aaccgtaacaaccgtctggcgcgcctccaagaaattttagctcccgagatcatcgttcgc
aacgaaaagcggatgctgcaagaagcagtggatgctttgattgacaatggtcgtcgggga
cgcacggttgtaggggcaaacaaccgcccactcaagtctttgtccgacattattgaaggt
aagcaaggacgtttccgacaaaacttgctagggaaacgggttgactactccggacgttcc
gttattgtggtgggaccaaagcttaacattcaccagtgtggtttgccacgagaaatggca
attgagctattccaaccatttgtcatcaatcggctgattcgtagcggaatggtgaataac
atcaaagctgcgaaaaagctgatctctcgttctgacccgagtgtttgggatgttctagaa
gaagtgattgaaggacacccagttttgctcaaccgtgcgccaactctacaccgtttgggt
attcaagctttcgagccaattttggtggaagggagagcaattcagttgcacccactcgtt
tgtccagcatttaacgccgacttcgacggtgatcaaatggcggtacacgtaccattatct
ttggaatctcaagcagaagcgcggttactgatgttggcatctaacaacattttgtcacca
gcgactggtagaccaatcatcacacccagccaagacatggtgttaggggcgtattactta
accgcagaaaatccccatgcgacaaaaggtgcagggcgatactttgcttctcttgatgac
gtagtcatggcttatgaacagcagcaaattgacctgcatgcctatatctacgtacgcttt
gacggcgaagtagagtcaggtgaaccagatacagaaccagttgaagtgataccaaatgac
gatggtagccggactttgatgtacaaattccgccgaattcgtgaagatgctcagggcaac
ctggtttctcagtatatacgcacaaccccaggtcgcgttatttacaataaagcgattcaa
gaagcactggcaagctaa
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