Nostocales cyanobacterium HT-58-2: BZZ01_25195
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Entry
BZZ01_25195 CDS
T04905
Name
(GenBank) RNA polymerase subunit sigma
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ncn
Nostocales cyanobacterium HT-58-2
Brite
KEGG Orthology (KO) [BR:
ncn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncn03021
]
BZZ01_25195
Transcription machinery [BR:
ncn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZZ01_25195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HNH_repeat
HTH_28
HTH_11
MerR_1
Motif
Other DBs
NCBI-ProteinID:
ARV61489
UniProt:
A0A1Y0RUJ8
LinkDB
All DBs
Position
6102194..6103150
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AA seq
318 aa
AA seq
DB search
MKTAQTATDLVRTYLREIGRVPLLSHEEEIHYGKQVQRATALHEVKESLAMQLGRQPTQE
EWAKATNIELTELNEAIADGEIAKNKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGM
QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKAQRQLSQ
KLGRAPTASELAQELELTPRQVREYLEKARVPLSLDLRLGDNYDTELGEMLEDTGVSPEE
FVAQSSLSYDLERLMADLTPQQREVISLRFGLKDGHAHTLASIGELLNISRERVRQIERE
ALTKLRKSKADINEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgctcagacagccacagacctcgtgcggacttatctacgtgagattggccgt
gtgccactcctatcccatgaggaggaaatacattatggcaaacaggtgcaacgtgcaacg
gcattgcacgaagtgaaggagtctcttgcgatgcagttaggtcgtcaacccactcaagaa
gaatgggcaaaagcgacaaatatagaactaacagagttgaacgaagcgatcgcagacggt
gaaattgccaaaaacaagatggtagaagccaatttgcgactggtcgtatctgtagccaaa
aagtacattaagcgtaatgtagatctcctcgacttgattcaggaagggagtatagggatg
caacgaggtgtggaaaagtttgaccccaccaaaggctacaggttttcgacatatgcttac
tggtggattcgtcaggctataactcgggcgatcgccgaaaaaggtcgcactatccggttg
cctatccacatcactgagaaattgaataaaattaaaaaggcacagcgacaactctcacaa
aaactaggacgcgcccccacggcttctgagttagctcaagaattagaattgactcccagg
caagtgcgcgaatatctagaaaaggcgcgggtgccgttgtctttggatttgcgattgggg
gataactacgatacagaattaggggaaatgttggaagacactggcgtttctccagaagaa
tttgttgctcaatcctccctttcatatgatttagagcgtctcatggcggatctgacccca
cagcaaagggaagtcatatccctgcgctttggtttaaaagatgggcatgcacacactctc
gccagtattggtgaactcctcaatattagccgcgaacgagtgcggcaaattgagagagaa
gccttaacgaaactccgtaagtctaaagccgatataaatgaatatttggctagttag
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