Nitrosomonas communis: AAW31_01290
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Entry
AAW31_01290 CDS
T03942
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nco
Nitrosomonas communis
Pathway
nco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAW31_01290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nco03021
]
AAW31_01290
03400 DNA repair and recombination proteins [BR:
nco03400
]
AAW31_01290
Enzymes [BR:
nco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAW31_01290
Transcription machinery [BR:
nco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAW31_01290
DNA repair and recombination proteins [BR:
nco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAW31_01290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKH36751
UniProt:
A0A0F7KAY0
LinkDB
All DBs
Position
complement(290802..295064)
Genome browser
AA seq
1420 aa
AA seq
DB search
MKALLDLFKQVTQKEEFDSIKIGLSSPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLVDCQLLTEDDYLNKTEEYGDDFSAGI
GAEGIRDLLNKLDIVAEIDSLRREMQSTGSETKLKKIAKRLKVLEAFNRSGIKPEWMVLT
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPEIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKKMALELFKPFIFNKLESMGIASTIKAAKREVENESPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEC
RTLMMSTNNILSPANGDPIIVPSQDIVLGLYYMTREKVNARGEGMFFPDVAEVSRAYENH
VVELNAKVVVRIKEVEKRKEEGEQVEQVEKITRYETTVGRALLSEILPDGLPFSVINKVL
KKKEISKLINTCFRLCGLRETVIFADKLMYSGFSYATRGGISICADDLLTPVQKNDIIKI
AEKEVQEIAAQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMDQLSVEPVYDPLAGMVKQ
DENGKPIMQESFNSIYMMADSGARGSAAQIRQLSGMRGLMAKPDGSIIETPITANFREGL
NVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVITEEDCGTDNGVVVKALIE
GGEVIEALRERILGRVTSQDIVNPENQEIIYPAGILLDEETVEKIELYGIDEVKVRTPLT
CATRYGLCVKCYGRDLGRGTAVDVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTVVV
SQVESKSNGVIHYSPTMRYVKNARGELIVISRSGEVVVYDENGRERERHKVPYGATLLVH
DGEVVKVGKVLTTWDPHTRPIIAEYSGKVRFENVEEGVTVAKQIDDITGLSTLVVIDPKR
RSATQTKGLRPLVKFLDEEEKEIKIVGSDLPVSITFQIGSIISVRDGQQVSVGEVLARIP
QETSKTRDITGGLPRVAELFEARSPKDAGLLAEVTGTVSFGKDTKGKQRLVITDLDNIAH
EYLIPKDKHVMAHDGQVVNKGETIVDGPADPQDILRLQGVEALARYITDEVQDVYRLQGV
RINDKHIEVIVRQMLRRVQIIDAADSSFIPGEQVERADVLAENEKLLAENKTPATYEYML
LGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLSFH
NIRKKQRQQSMANINSHLPQKVAEETDSESITANNDVSFK
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttgcttgatttatttaaacaagttactcagaaagaagagtttgattcaatt
aaaattggtctttcctctccagaaaaaatacgttcttggtcatacggtgaagtaaaaaaa
cctgaaacgataaactatcgtacctttaaaccagaaagggatgggttattctgtgccaag
atttttggtccagtaaaagactacgaatgtctgtgtggaaaatataaacgcttaaaacat
cgtggcgtgatttgtgaaaaatgtggcgtagaggtgaccttatctaaggttcggcgcgag
cgtatggggcatattgaattagcctctcccgtagcgcatatctggtttctgaagtcatta
ccttcccgtttgggactggtattagacatgacattacgagacattgagcgtgtgctctat
tttgaagcttatgtagtaactgatccaggcatgaccccccttgttgactgtcagttgctg
actgaagacgattatctcaataaaacggaagaatatggagatgatttttctgcagggatt
ggtgcagaaggtatacgagatctgttgaataaattggatattgttgcagaaattgattct
ctccgtcgcgaaatgcagagtacagggtctgaaactaagctaaaaaaaatagctaaacgt
ttaaaagtactggaagcatttaatagatcaggtataaaaccagaatggatggtgttaacg
gtactgccagtactgccaccagaactgaggccgcttgtgccattagatggagggcgtttc
gcaacctctgatttaaatgacttataccgtcgtgttattaaccggaataatcgactaaaa
cgtctgctcgaacttcgagcgccggaaattatcgtgcgtaatgaaaaacgtatgttacaa
gagtcagtcgattcacttcttgataatgggcgtcgtggcaaggcaatgacaggagccaat
aaacggccattaaagtctctcgccgatatgattaaaggcaagggaggacgtttccgccag
aatctactgggtaagcgcgtcgactattctgggcgatcagtcattgtggtgggtcctcag
cttaagttacatcaatgtggcttaccgaaaaaaatggcgcttgagctatttaagccgttt
attttcaataagttagaatctatgggtattgccagcactattaaggcagccaagcgagaa
gtggaaaatgagagtccagtcgtgtgggatattctggaagaggttatccgagagcatccg
gtaatgttaaaccgagcgccaacacttcatcgattgggtattcaggcgtttgagccggtg
ttaattgaaggcaaagcaattcagctacatcctcttgtttgtgcagcttttaatgcggac
tttgatggagaccagatggccgtacatgttccattatctcttgaggcgcaaatggaatgc
cgtaccttgatgatgtcaactaataatattttgtctcctgctaacggcgatcctatcatc
gtaccttcacaagacatcgtgctcgggttgtattatatgactcgggaaaaggttaatgcg
cgcggtgagggtatgttttttccggatgttgcggaggtatcacgcgcgtatgaaaatcac
gttgttgagcttaatgccaaagtggtagtaagaataaaggaagttgaaaagaggaaggaa
gaaggagaacaagtagaacaagtagaaaaaattacacgctatgaaacaactgtaggtcgc
gcgttattatcggaaatcttgccagatggacttcctttttctgtgatcaataaggtactc
aagaaaaaggaaatttcaaagctgatcaatacatgctttcgtttatgcggtttacgtgaa
acagttattttcgcagataaactcatgtattcaggtttttcctatgcaacgcgaggtggt
atctctatttgtgcggatgatttgcttacacctgttcaaaaaaatgacatcataaaaatt
gcggagaaggaagtacaggaaatagcggctcaatatacttcaggtttagtgacccagggc
gagcgctataacaaagtagtggatatttggggacgtgccggtgatcaggttgctaaagcg
atgatggatcaattaagtgtagaaccggtatatgatcccttagcaggaatggtaaaacaa
gatgaaaatggcaaaccgataatgcaggaatcatttaattcaatttacatgatggccgat
tcaggtgcgcgcggctcggcagctcagattcggcaactttcgggcatgcgtggattaatg
gctaagcctgatggttctatcattgagacacctattacagcaaatttccgtgaagggctg
aatgtactgcaatattttatttctactcatggcgcacgtaaaggacttgctgatacagct
ttgaaaacggctaattctggctatcttactcgtcgtttggtggatgttactcaggattta
gtgattactgaagaggattgcggcacagataatggtgttgtagtgaaagcgctgattgaa
ggtggtgaggttattgaggcgttacgtgagcgcatactcggccgagtaacttcgcaagac
atcgttaatccagaaaaccaggagattatttatcctgcaggcattttacttgatgaagag
actgttgaaaaaattgaattatatggaattgatgaggttaaagtacgtaccccgcttacg
tgtgcaactcggtacgggttatgtgtcaagtgttatggacgcgatttaggccgagggacc
gcagtagatgttggtgaggcagttggtgtgattgctgcacaatctattggcgaacctggg
acacaattgaccatgcgaacattccatatcgggggcgctgcttcaagaacagtagtggtg
agtcaggttgagagtaaatcaaatggcgtgattcattattctcctacgatgcgatatgta
aaaaatgctcgcggtgaattgatagtcatctctcgcagtggagaagtggttgtttatgac
gaaaatggacgtgagcgagaacgccataaagtaccttatggtgcaacattactcgtgcat
gatggtgaagtagtaaaagtgggcaaagtattaacaacatgggatccccatacacgtcct
attatcgcagaatatagtggcaaggtacgttttgaaaatgttgaagaaggtgtgacagta
gcaaaacaaattgatgatataacaggtttatctacacttgttgtcatagatcccaagcgt
cgtagcgctacacaaactaagggattgcgtccattggttaaatttttggatgaagaagaa
aaagaaattaaaattgtgggtagtgatttgccagttagtatcacattccaaattggctcc
attatttctgtacgggatggacagcaagtaagtgttggagaggtattagctcgtattccg
caggaaacttcaaaaacccgtgatattacgggtggcttgccgcgtgtggctgaattattt
gaagccagatcgcctaaagatgcaggtttattagcggaagttactggtacagtatctttt
ggtaaagatactaaaggaaagcaacgcctcgtcatcactgatcttgataatattgcacat
gaatatctaattccaaaagataagcatgttatggcgcatgatggccaagttgtaaataaa
ggtgagacgattgttgatggtcctgctgatccacaagatatattacgtcttcagggggta
gaggcattagcccggtatattactgatgaggtacaagatgtttaccgtttacagggcgta
aggataaatgataagcatattgaagtgattgttcgccaaatgttgcgtcgtgtacaaatt
attgatgcagcagattcatctttcattcctggcgaacaagttgagcgagctgatgtgcta
gcagaaaatgagaaactgcttgctgaaaataaaactcctgcaacatatgaatacatgtta
ctaggcattactaaagcatcgctctcaacagattcatttatctctgctgcttcttttcaa
gagacaacccgtgttcttacagaagcagcaatcatgggaaaaagagatgatctgcgcgga
ttaaaagaaaatgttattgtaggaagattaattcctgcaggaacagggttatcgtttcat
aatatccgtaaaaagcaaagacagcaatcaatggctaatataaacagtcatttacctcaa
aaagttgcggaagaaacagatagtgaatctataactgctaataatgacgtctctttcaaa
tag
DBGET
integrated database retrieval system
