Nitrosomonas communis: AAW31_04180
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Entry
AAW31_04180 CDS
T03942
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nco
Nitrosomonas communis
Pathway
nco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAW31_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nco03019
]
AAW31_04180
Enzymes [BR:
nco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAW31_04180
Messenger RNA biogenesis [BR:
nco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAW31_04180
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
ERCC3_RAD25_C
UvrD-helicase
P-loop_SecA
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKH37194
UniProt:
A0A0F7KED3
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All DBs
Position
954811..956343
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AA seq
510 aa
AA seq
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MFVQSKTLKTTLITSPFNELGLSKPILRAIADAGYITPTPIQLKAIPQILCGSDLLAGAQ
TGTGKTAGFTLPILQLLSQKKATSLGKGRPRCLILTPTRELAAQVEESVKTYGKYLSLTS
SVIFGGISINPQIMRLRKPLDILVATPGRLLDHVGQRTLDLSGIEILVLDEADRMLDMGF
IHDIKKILALLPKQRQSLLFSATFSDEIRALAATLLRNPTFVEVAHRNTASELVEQSVHL
VDQSHKRDLMSYLIKYHNWQQVLVFTRTKHGANRLAEKLIKDGIEAAAIHGNKSQGARTK
ALSQFKQGTVQVLVATDIAARGLDIDQLPQVVNFELPNVPQDYVHRIGRTGRAGSPGAAI
SLVDREEMKHLRDIERLIKRELPKTTAPGFVAPAKIEPEAPRPANQQRRAINQGNKPNQT
SRKAGERAKQAVNSRAKYERLEQPKQPRQHSSNPTPRSKPAGTQQRSDNAQNSPKKQPAQ
KMSEAARHQAMPQTTWFSPKSSNYSGKRGH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgttcaatcaaaaactctaaaaacaacccttatcacctctcctttcaacgagctg
ggattaagtaagcccatcttgcgcgcgattgccgacgctggctacatcacgcccacccct
atccagctcaaagctattccgcaaatattgtgcggtagcgatctgcttgctggcgcgcaa
accggtaccgggaaaactgccggcttcacattacccatcttgcaattactgagtcagaaa
aaagctaccagtttaggaaaaggccgtccacgctgtttaatcttgacacccacgcgcgaa
ctagccgcacaagtagaagaatcggtcaaaacttatggcaaatatctatcgcttacttcc
agcgtcatatttggcggaataagtatcaacccgcaaattatgcgcttgcgcaagccactg
gatatcctggtcgccacccctggccgtctgctcgatcacgttggccagagaacactggat
ttatctgggattgagatcctcgtgctggatgaagccgatcgcatgctggatatgggcttc
atccacgatattaaaaaaattcttgcattgctgcctaaacaaaggcagagcctactgttc
tctgccaccttctcagatgaaatcagggcgctggctgctactctgctaaggaacccaact
tttgttgaagtggcacatcgcaacactgcgtcagagctggtcgagcaatcggtgcattta
gtggaccaaagccataagcgtgatctgatgagttatctgatcaaatatcataattggcag
caagtgctggtttttacccgaaccaaacatggcgccaatcgcttggcagaaaagctgatc
aaagatgggatcgaagctgccgcgattcatggcaacaaaagccaaggcgctcgcaccaaa
gcattatcccaattcaagcagggaaccgtacaggtgctggttgcaaccgatatcgctgca
cgcgggctggatatcgaccaactgccgcaagtggtaaattttgaactgccgaatgtacct
caagattatgtgcaccgcattggccgcactggccgtgcaggtagccctggcgctgcgata
tcgctggtagaccgtgaagaaatgaaacacctccgcgacatagaacgactgataaaacgt
gagcttcccaaaacaactgccccaggctttgtcgcacctgccaaaattgaacctgaagca
cccaggccagcgaatcaacaacgacgcgccatcaaccaaggtaacaagccgaatcagacc
tcccgcaaagcaggagagcgcgctaagcaagcagtcaatagtcgcgcgaaatatgaacgc
ctggaacaacccaagcaacccagacaacacagctcaaaccctaccccccgctcaaaacca
gccggtactcagcagcgctcagacaatgcgcaaaactcacccaagaaacaacctgctcaa
aaaatgtctgaagctgcacgccatcaagccatgccccagaccacctggttttcgccaaaa
tcaagcaactattcaggcaagcgtgggcattaa
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