Nitrosomonas communis: AAW31_11480
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Entry
AAW31_11480 CDS
T03942
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nco
Nitrosomonas communis
Pathway
nco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAW31_11480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nco03019
]
AAW31_11480
03016 Transfer RNA biogenesis [BR:
nco03016
]
AAW31_11480
Enzymes [BR:
nco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAW31_11480
Messenger RNA biogenesis [BR:
nco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAW31_11480
Transfer RNA biogenesis [BR:
nco03016
]
Prokaryotic type
tRNA degradation factors
AAW31_11480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
S1_TP0910
KH_SLS1_2
KH_KhpA-B
RNase_II_C_S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AKH38276
UniProt:
A0A0F7KFK9
LinkDB
All DBs
Position
2534404..2536512
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AA seq
702 aa
AA seq
DB search
MELIKKSITYGRHRLTLETGEIARQAHGSVIVSLDDTVVLVTVVGDKSTKPGQDFFPLTV
DYQERFYAAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPAGFYNEVQVVATVLSAE
VEVDADIAAMIGASAALVLSGIPFDGPIGAARVGYINNEYVLNPTTTELKEAQLNLVVAG
TQQAVLMVESEAMELSEEIMLGAVMFGHEQMQAVINVINEFVDEAGVTAWDWKPAENDPV
LIESISQLAEADLRNAFQLKQKQIRNETIKEVWQRVYTELGVGAEEGPDEQSVREIGFEL
EARIVRSQILDGEARIDGRGTRTVRPISIRHGVLPRTHGSALFTRGETQALAVATLGTAR
DEQKFDTLQGDYTERFMLHYNMPPFATGEIGRVGTPKRREIGHGRLAKRALEAVLPPPEE
FGYSLRVVSEVMESNGSSSMASVCAGCLALMDAGVPLKAHVAGIAMGLIKEGNRFAVLTD
ILGDEDHLGDMDFKVAGTEKGITALQMDIKIQGITKEIMQVALLQAKEGRLHILDIMKNA
LPATRENISTHAPRIIKFKINPEKIRDVIGKGGAVIRALTEETNTTIDISDDGTVTVACI
NSEGGELAKKRIEDITAEVEVGKIYTGVVLKLLDFGAIVSILPGKDGLLHISQIAHERVE
DVATHLKEGQTVRVKVLEADEKGRLRLSMKAVTEVETEIVPS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttggaactaataaagaagagtattacctacggtcgccatagacttactttggaaaccgga
gaaattgcgagacaagctcatggttcagtgatagtttcgttggatgatacagtcgtattg
gtgactgtcgtcggagataaaagtaccaaacctgggcaagatttttttccgttgaccgtt
gattatcaagaaagattctatgctgcaggtcgtattcccggaagtttctttaaacgtgag
gggcgcccttccgagaaagaaacacttacttcaagattgatcgatcgtcctattcggcca
ttatttcctgctggcttttataatgaagtgcaagtggttgcaaccgttttatcagctgaa
gttgaagtggatgctgatatcgcagcaatgattggtgcttccgctgcgctagtactttcg
ggtattccctttgatggtcctattggggccgcccgtgttggttatatcaataatgaatac
gtactcaatccaactaccaccgaattaaaagaagctcagcttaacctggttgttgctgga
acacagcaagcggtcttaatggttgaatcagaagcaatggaattatctgaagagatcatg
ctaggcgccgttatgtttggtcatgagcagatgcaagcagtcattaatgtcattaatgaa
tttgttgatgaagctggcgttactgcatgggattggaaaccagctgaaaatgatccggta
ttaattgaaagcatttcacaattggcagaagcagatttgcgaaatgcttttcaattaaaa
caaaagcaaattagaaacgaaaccattaaagaagtttggcaacgcgtctacacagaatta
ggtgtcggcgctgaagaaggtcctgatgagcagtccgtcagagaaatcggctttgaactc
gaagcccgcattgttcgtagtcagattcttgatggagaagcgcgtatagatggacgtggc
acaagaactgtgcgccctatctcgatacgccatggtgtacttccacgaacacatggctca
gcattatttacacgaggtgagacacaagcgctggccgtggccacattaggaacagcacgc
gatgagcagaaatttgataccctacagggagattataccgaacgcttcatgcttcattac
aatatgcctccttttgctacaggagaaattgggcgtgtcggtacgccaaagcgacgcgaa
ataggccatggtcgtctcgcaaaacgtgcattggaagcagtgcttcctccacctgaagaa
tttggttattcgttaagagtcgtttcggaagtgatggaatccaatggttccagctctatg
gcttcggtttgtgctggttgtcttgcattgatggatgcaggcgttcccttgaaagcgcat
gtggcaggtattgccatggggctgattaaagaagggaaccgctttgctgtgcttaccgat
attcttggtgatgaagatcacttgggcgatatggatttcaaagtggcaggtactgagaaa
ggtattactgcactgcaaatggatataaaaattcaagggattaccaaagagattatgcag
gtagccttactacaggcgaaagaaggccgcttgcatatcctggatatcatgaagaacgct
cttcccgctacccgggaaaacatttcgactcacgctccgcgcattatcaaatttaagatt
aatccggagaaaattcgtgatgtgatcggtaaagggggcgccgtcatccgtgcactcact
gaagaaactaatacgaccatagatatcagtgatgacggcacagttacggttgcctgcatt
aatagtgagggcggggagcttgcaaagaaacgtatcgaggatattacagcagaagtagaa
gtaggtaagatatatacaggcgtagtattaaaattgctcgattttggcgcaattgtgagt
atattgcctggaaaagacggcttgctgcatatttctcaaattgctcatgagcgtgttgaa
gacgtagctactcatcttaaagaaggacaaactgtgcgagtaaaagtcttggaggctgat
gaaaaaggtcggctccgtttaagcatgaaagcggttactgaggtcgaaacagagattgta
ccttcctaa
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