Nitrosomonas communis: AAW31_18255
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Entry
AAW31_18255 CDS
T03942
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nco
Nitrosomonas communis
Pathway
nco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAW31_18255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nco03019
]
AAW31_18255
Enzymes [BR:
nco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AAW31_18255
Messenger RNA biogenesis [BR:
nco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AAW31_18255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CCDC138_cc
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AKH39313
UniProt:
A0A0F7KJX0
LinkDB
All DBs
Position
complement(4018671..4020137)
Genome browser
AA seq
488 aa
AA seq
DB search
MSNPTAFDQLNLSSELLRAISDHGYVKPTPIQAQVIPHILEGKDIMGSAETGTGKTASFT
LPMLHRLQSHANSSASPAKHPIRALILAPTRELATQIHDNVKNYGKYTQLRSTVIFGGTS
IDPQIKELQAGVEILVATPGRLLDHIEQKTINLSNVTILVLDEADRMLDMGFLPDIKRIL
MLLPQQRQSLIFSATFSEEIKQLADKLLKQPILIEVAKRNAINQSISHRVHLVNLERKHE
LLVQLIKQNDLKQVLIFVRTKQGADRLAKLLLQYDVITTAIHGDKNQQQRTQALNDFREG
KIQALVATDVAARGLDIESLTYVINFELPTVPEDYIHRIGRTGRAGSKGNAISLVSENEK
EYLVGIEKLLQTKLAVTKTNGFETGKSHYSVFPQTTHHQGHNGKLMHHKTGLERSKHSGG
KQQPASYGRNKPSRPIPVDPIFTQPYVPMALVKKSDTSDKVSHSISQPNKKVIPALFTPF
LIDKRKQD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcccacagcatttgatcaattaaatttatcaagtgagcttctgagagcaatc
tcagatcacgggtatgtcaaaccgaccccaatacaagctcaggttataccacatatcctt
gaaggcaaagacataatgggtagtgccgaaacaggcacaggaaaaacagctagctttacc
ttacccatgttgcatcgattgcaatctcatgcgaattcgagtgcctcaccagccaagcat
cctattcgagcattgatacttgcacctacacgtgaacttgctacgcagatacatgataat
gtcaaaaactacggaaaatatacacaattacgaagcacggtaattttcggcggtacgagt
atcgatcctcaaattaaggaactgcaagctggagtagaaattctggtcgcaacacccggc
cgtctattagatcacattgagcagaaaaccatcaatctatctaacgtaaccattttagtc
ctggatgaagctgatcgtatgctcgatatgggcttcctgccagatatcaagcgtattctt
atgttgcttcctcagcagcggcagagcttgattttttctgccactttttctgaggaaatc
aagcaacttgctgacaagctgctgaagcagccaattttaattgaggtggcaaaacgcaat
gcgattaatcaatccatctcgcacagggttcatttagttaaccttgaacgcaagcatgaa
ttattggtgcagttaattaagcaaaatgatcttaaacaggtcttgatttttgttagaacc
aaacaaggtgcagatcgtctggccaagctacttttgcagtatgatgtaataacaacagcg
attcatggcgataaaaatcagcagcaacgtacccaagcacttaatgatttcagagaagga
aaaattcaggcattggtggcaactgatgtagccgcacggggattggatattgagagtctt
acttatgtaattaacttcgagttaccaactgttccagaagattatatccatcgcattgga
cgaacaggccgtgcggggagtaaaggtaatgccatttcgttagtaagtgaaaatgaaaag
gaatatctggtaggtattgagaagctgctccaaacgaaactggctgtgacgaaaacgaat
gggtttgaaactgggaagagtcattattctgtttttccacaaactacgcatcatcaaggg
cataatggcaagctaatgcatcataagactggcttagaaaggagtaaacatagtgggggt
aagcagcaaccagcttcttatggaagaaataaaccatctcgacccattccagttgatccg
atctttactcaaccatatgtacctatggcgctggtaaagaaatcagataccagcgataaa
gtttctcattctattagtcaaccgaataaaaaggttattccggcactctttacgccgttc
cttattgataagcgcaagcaagattaa
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