KEGG   Nymphaea colorata (blue-petal water lily): 116245609
Entry
116245609         CDS       T07418                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC116245609
  KO
K12828  splicing factor 3B subunit 1
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Pathway
ncol03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116245609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncol03041]
    116245609
   03036 Chromosome and associated proteins [BR:ncol03036]
    116245609
Spliceosome [BR:ncol03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116245609
 Complex B
    116245609
 Complex C
   U2 SnRNP specific factors
    116245609
Chromosome and associated proteins [BR:ncol03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    116245609
SSDB
Motif
Pfam: PPP2R1A-like_HEAT SF3b1 HEAT_EZ TOR1L1_N HEAT HEAT_2 HEAT_EF3_N XMAP215_CLASP_TOG Cnd1 Htt_N-HEAT_1 IFRD Adaptin_N Dopey_N mTOR_dom RRP12_HEAT
Other DBs
NCBI-GeneID: 116245609
NCBI-ProteinID: XP_031472928
LinkDB
Position
Unknown
AA seq 1024 aa
MDQKSSTTHVESTPKRTRWDSTPMVRHELNADPRRINDRTPARPNAEQTPSRFSETPLRR
GEAQTPQRWDDRTPMIGGATPSYAGATPTPNNLKTPDILNLTSKKLELLRWEKELXERNR
PYSEXELDMLLPGNDDGYEILKPPENYAPQTKAGQAPLSQQYRMPEAEVASQPNLEAATG
DLPPIKPEEYKFFAPLLENVKEDXLSIEEQKERKILAMLLKIKDGNPQMRKSALRQITIN
AREFGAGPLFNHILPLLMATSDPQQRHLLVKVIDRILYKLDDLVRPFVKKILVVILPMLI
DEDYYARVEGREIISNLAKAAGLPTMITNMRADLDHKDEFVRNTAARAFAVVASALGIGA
LLPFLKAVCLSKKSWXARYTGIKIVQQVAILMGCSILPYLKQLVEIIKHGLDDVQKKVKS
MTALSIAALAEAAAPYGIEAFNSVLXPLWKRITXVRDKSLGAFLKAVGFIFPLMEARHAS
QYIRTIMPTLIRQFESPDEXMRKIILKVLKQVVGCSGVEATYLRXHVLEPYFRCFWVRRM
ASEKRNYKQLIETTVEIATRVGVIXIVEKLHLGLKDXNESYRKMVMEGITKILXTEHGTE
IGYAEENFRNXLVDCVLAAFHEQTTDDSTILDGFGAVINALGLRAKPYFVQIVGTIHWRL
NHKNIRVRQQAADLVSKIAKSMRICGEESRLGRLGLNLNECLREEYPEVLGSILGALKSI
VVEVGMAKMTPPIRDLLPRLTPILKNRNEKVQXNCIELVGRIADKGADEVSPKEWIRICF
DLLEMLKAHKKNIRRATITTFGYIARAIGPQDVLVTLLNNLKVQERQLRVCTTVAIAIVS
ESCGPFTVLPALMNEYRVQELNVQNGVLKSLAFMFEYIGEMAKDYIYAVTPLLEDALTDR
DLVHRQTAAAAIKHLALGVQGFGCEDALIHLLNFIWPNIFETSPHVINSVLEAIEGIRCS
VGPGIILMYTLQGLWHPARRVRQIFWRIYNMIYVGSQDSLVPFQPELRDDNFNHYGQPEL
MMSL
NT seq 3075 nt   +upstreamnt  +downstreamnt
atggatcaaaagagctcaaccactcacgtcgagagcactcctaaacgtacaagatgggat
tctacgcccatggtcaggcatgagctcaatgcagacccgcgcagaataaacgatcggaca
cctgccagaccaaatgccgaacaaactccaagcaggttttctgaaacaccgctgaggagg
ggtgaagctcagactccacaacgttgggacgacagaactcctatgattggtggtgcaact
cccagctatgcaggagccaccccaactcccaataacctcaaaactccagatatcctcaac
ctcactagcaagaaattggagttgctgcgatgggagaaggaactctaggagaggaacaga
ccctattctgagtaagaacttgacatgcttttgcctggaaatgatgatggatacgaaata
ctgaagccgccagagaactatgccccacaaacaaaggcaggtcaggctccactttcccag
cagtataggatgcctgaagcggaagttgcctcacagcccaacctggaggcagccacaggt
gatttaccacccattaagcctgaagagtataagttttttgcacctctattggagaatgta
aaggaggactaattgtcaatcgaggagcaaaaggagcgcaaaatattggctatgctactt
aagataaaggatggaaaccctcaaatgagaaaatctgccttgagacagatcacaatcaac
gcaagagagttcggagccgggcctcttttcaaccacatcctaccacttctgatggctact
tcagatccacagcaacgccatttgcttgtgaaggtcattgaccgcattctctataaattg
gatgacttggtgagaccctttgtgaagaagattttggtagtcatcttgcccatgcttatt
gatgaggactactacgctcgtgtggagggcagggagatcatcagcaaccttgcgaaagct
gcaggcttgcccaccatgatcacaaatatgcgtgctgatctcgaccacaaggacgagttt
gtcagaaacacagctgctcgtgcctttgcagttgtcgccagcgctcttggaatcggtgct
ttattgccgttcttgaaagcagtctgcttgagtaagaagagctggtaggcaaggtatact
ggaatcaaaatcgttcagcaggtcgctattcttatgggttgctctattcttccttatctt
aaacaacttgtggaaatcatcaagcatggtctagatgatgttcaaaagaaagtcaagtca
atgactgctctttcgatcgctgcgttggctgaagcagcagcaccttacggaattgaagcc
ttcaacagcgtcctctagcctttgtggaaaaggattacctaagttcgcgataaatcgctt
ggagctttcctaaaggcagttggtttcatcttccctctcatggaagctcgtcatgcttct
caatatatccgaacaatcatgcctaccctaattaggcaattcgaatcacctgacgagtag
atgcgcaagattatcttgaaagtcttgaagcaggtggtaggatgttcaggtgtagaggca
acctacttgcgttaacatgttttggagccttatttccgttgcttctgggtgcgcagaatg
gcttctgaaaagagaaactacaagcaactcatcgaaaccacagtggaaatcgctactcgg
gtgggtgtgatctaaattgtagagaagcttcaccttggtctgaaagactaaaacgagagc
tatcgtaaaatggttatggagggcatcacaaagatcctatagaccgaacacggcacagag
attggttatgctgaggaaaatttcagaaactagttggttgattgtgttcttgctgctttc
cacgagcaaacaactgatgactctaccatcttagatggctttggagcagttatcaatgct
ttgggacttcgtgcgaagccttactttgttcaaattgtgggaacaatccattggagactc
aaccacaagaatattcgagttagacagcaagctgctgatctggtctcaaaaattgccaaa
tccatgcgcatttgtggagaggaaagtaggttgggtagattgggcctgaacttgaacgaa
tgccttcgtgaagagtatcctgaggttctcggaagtatcctcggagcactcaaaagcatc
gtggtagaggtgggtatggcgaagatgaccccgcctatccgcgatctacttccacgtctc
actcctattctcaagaatcgtaacgaaaaggttcaataaaactgtattgaactagtgggt
aggattgcagacaaaggtgcagatgaggtttcacctaaggaatggatcagaatctgcttc
gacttactggagatgctcaaggctcacaagaagaacattaggagagccaccattaccaca
tttgggtatattgctcgtgctattggtcctcaagacgttttagtcactctactaaacaac
ttgaaagttcaagaaagacagctgagagtctgcacaactgttgcgattgcaatcgtttca
gaatcttgtggcccatttactgttctgcctgctcttatgaacgaatatcgtgtgcaggaa
ctgaatgtgcaaaacggtgtgctgaagagtttggcgttcatgtttgaatacatcggcgaa
atggcaaaagactacatttacgctgtgactcctctattggaggatgctcttactgatcgt
gatcttgtccatagacaaactgcagctgcagccatcaagcacttagctctaggagtgcaa
ggctttggctgtgaggatgctttgattcacttgctgaactttatctggccaaacatcttc
gaaaccagtccccatgtgattaactccgtcttagaggctatcgaaggcatccgctgtagt
gtaggaccaggaatcatcctgatgtacactctgcagggactctggcatccagcacgaaga
gtgaggcagatcttctggagaatctacaacatgatctacgtgggaagccaggacagcctt
gtacctttccagccggagctacgggacgataactttaaccattacggacagccagaactc
atgatgagtttatga

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