Nymphaea colorata (blue-petal water lily): 116245711
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Entry
116245711 CDS
T07418
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116245711
03012 Translation factors [BR:
ncol03012
]
116245711
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116245711
Translation factors [BR:
ncol03012
]
Eukaryotic type
Initiation factors
eIF-3
116245711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_ELP1_1st
VioE
Motif
Other DBs
NCBI-GeneID:
116245711
NCBI-ProteinID:
XP_031473083
LinkDB
All DBs
Position
1:complement(25466324..25472135)
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AA seq
733 aa
AA seq
DB search
MVMDVVANGHHLLDAMAEPPTPASHLVVDPSQIDVSRVDLDSIQLPPGENFGILSDDEDV
IESETLEYDSGFENVIVVDNLPVVGPDKFEKLEGVVRKIFGQIGMIKEKGLWMPMNPETQ
KTQGYCYIEFNTKQEAESAKEKTNGYKLDRSHIFAVNMFDDFDRFMKVPDEWTPAEIKPF
TPGENLHKWLTDEKARDQFVVRYGADTEVLWNDPRQSKPELVYSRKHWTESFVQWSPLGT
YLATVHRQGAAVWGGATTFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDTQTVV
LNIFDVRTGKIMRDFRGRADEFATGGTGGVAGVSWPVFRWSGGKEDKYFARIGKNAISVY
ETETFGLLDKKSIKIENVMDFSWSPADPILALYVPEGGGGNQPARVSLIQIPGREELRQK
NLFSVSDCKMYWQSSGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDK
VIAFAWEPKGHRFAVIHGDNPRPDVSFYSMRTAHHTGRVSKLTTLKGKQANALYWSPSGR
FIILAGMKGFNGQLEFYNVDELETMATGEHFMATDIEWDPTGRYVATSVTSVHEMENGFH
IWSFHGKLLYRIPRDHFYQFLWRPRPPSLLPPEKEEEIARNLKKYSKKYEAEDQDVSLLL
SEQDREKRRLLQEEWDGWVKEWKERHEEEKVYRQELRDGEASDEEEEYEAKEVEVEEILD
VTEEVVSFGDEQE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggacgtggtcgctaacggccaccacctgctagatgcgatggcggagcctcca
acgccggcttctcacctggtcgtcgacccctcacagatcgacgtctcgagggtcgacctc
gactccatccagcttcctcccggggagaatttcggcatcttgagtgacgacgaagatgtg
atcgagagcgagactctcgagtacgattccggttttgagaacgtcatcgtggtcgataac
ctccccgtcgtcgggcccgacaagtttgagaagctggagggcgtcgttaggaagatattt
gggcagatcggcatgattaaggagaaggggctctggatgcctatgaatcccgagactcag
aagacgcaaggttattgctacatcgagttcaataccaagcaggaagcagagtcggcaaag
gagaagacaaatggttacaagttggataggtcacacatatttgcggtcaacatgtttgat
gattttgataggtttatgaaagttccagatgagtggactcctgctgagatcaagcctttt
acaccaggggaaaatctgcataagtggctgacagatgaaaaagctcgtgaccagtttgtt
gtacgctatggggcggatactgaggttttatggaacgatcctcggcagtcgaagccagaa
cttgtctatagtcgtaagcattggacagagagttttgtgcagtggtcacctttgggaaca
tatcttgccacagtgcacaggcaaggtgcagctgtttggggaggtgcgaccacatttaac
cgcttaatgagatatgcacatccccaggtcaaacttattgatttttctcctggagagaaa
tacttggtcacatacagtagtcatgaaccaagcaaccctcgggacacgcagacagttgtg
ctaaacatttttgatgtgaggacgggcaaaataatgagggatttcaggggacgagctgat
gaatttgccactggtggaacaggaggtgtagcaggcgtgtcatggcctgtatttagatgg
agcggtgggaaggaagataagtactttgctagaattggtaaaaatgctatcagtgtctat
gaaacagagacttttggcctcctggacaagaagtctattaaaattgagaatgttatggac
ttcagttggtctccggctgatcccatattggcattatatgttcctgaaggaggtggtgga
aatcagcctgctagagttagccttattcagattcctggtagagaggagcttagacagaaa
aatcttttcagtgtcagcgactgcaagatgtattggcaaagcagtggtgattatcttgct
gtcaaggtagacagatacacaaaaactaagaaaagcacctatactggctttgagctcttc
cgtataaaagaacgagatattccaattgaagtattggagcttgagaacaagaacgataaa
gttattgcatttgcctgggagccaaaaggtcatagatttgcagttatccatggtgacaac
cctcggcctgatgtcagtttttactccatgcgaactgcccatcacactggcagggtctca
aagcttacaacactgaaaggaaagcaagccaatgctctatattggtctccttctggccgc
ttcatcatacttgctggcatgaagggtttcaatgggcagctcgagttttataatgtggat
gaacttgagactatggcaacaggggagcatttcatggcaactgatattgaatgggaccct
acaggacgatatgtcgccacatctgttacttcagttcatgaaatggaaaacgggttccac
atttggtctttccatggcaagttgttgtacagaataccacgagaccacttttaccagttc
ctgtggcggccaaggccaccttcccttttgcctccagagaaagaggaggagattgcaagg
aacttgaagaagtacagcaagaagtatgaagcagaggaccaagatgtctcgttgttgttg
agcgagcaggatagagagaagagaaggctgttgcaagaggagtgggatggatgggtaaaa
gaatggaaagaacgacatgaagaagaaaaggtgtacaggcaagaactcagggatggggag
gcaagtgatgaagaggaggaatatgaggcaaaggaagtggaggttgaggaaatcctagac
gtcactgaagaagttgttagttttggggatgaacaggagtga
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