Nymphaea colorata (blue-petal water lily): 116245803
Help
Entry
116245803 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116245803 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116245803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116245803
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116245803
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116245803
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116245803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
DUF7764
Motif
Other DBs
NCBI-GeneID:
116245803
NCBI-ProteinID:
XP_031473225
LinkDB
All DBs
Position
1:complement(35487214..35492787)
Genome browser
AA seq
671 aa
AA seq
DB search
MFPVLPPPYRSQNQGQQGTVNALPGANHQLNNLSNLSNNFTQQMPQYPFPVPNNPLVPQN
VLVAPYVGSQLAAPVVAFDNRNANIPSLLGNPLSFQALDCQLICQNQPLSLNQPQGVVHS
NERPTVPSSASHMMTPPMIHGHSCAPSQVAQPGGFLNPGFVIGDCRMRPGNSALNCNAAV
VPSNMQLQNQCNFIAQLLNQNMMHLAQVLAQQVPVGGLPRPDQVTTGMHHSQPSWSTDGF
QQHLMHVSPPPAVNGHGSCSTAQSHPAARQNSSYVAGNSHTSQGNSLGLPVLTMNQNGSH
LAPAAAPNLTSGVFPLQGQSLQGMQQKEQMLKVKRNESDSLSIHSHGGQVKTGGISSRRG
YHGSHGKELKNSRFHKPSTNHLGQRNDKFMIRTGQVKKGVRNNTFLNSKGQEDQKRKRSI
HLTYTEEEILQWQEERKRNYPTTANIEKKAKMLLEMQKDGKSIDANAKIRRRQQLKEILA
KQAELGVEVAEIPPGYLSDSQKNCARGHKNKFGRGSFKNKYGRNTELRGDGKQLESLDDK
TSPRSVLNSRKPTLLQKLLSTDMERDKSRLLQVFRFMRINSFFEHCPEMHLRLPLVTARD
CQSSSTPTESIALANVRIGGYDDDNDDDDENDGVGNVGPQDDGLDATVAVIKEEQKISDI
IEDQEEGEIID
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtttccggttctacctccgccttaccgcagccagaatcaaggccagcagggaacggtg
aatgctcttcctggggcaaaccatcaacttaataatctttctaatttgagcaacaatttc
acccaacagatgcctcaatatccgtttcctgtgccaaacaatccactggtcccccaaaat
gtgctggtcgctccatacgtgggcagccaactcgcagctccggtggtggcgtttgataat
cgtaatgcaaacatcccgagtttgcttggcaacccattgagttttcaagcactagattgt
caactcatttgtcagaatcagccgctgtctttgaatcagcctcaaggtgtcgtgcattct
aatgaacgccctactgttccttcatcggcttctcatatgatgactccgcctatgattcat
ggtcattcatgcgctcccagtcaagttgctcaaccaggtggttttctgaaccccggattc
gttatcggcgactgtcgaatgcgtcccggcaattctgctctgaactgtaatgctgctgtt
gtgcctagtaatatgcaactgcagaatcaatgcaatttcatagcccaattactgaatcag
aatatgatgcacttagcacaggtacttgctcagcaagtacctgtcggaggcttacctcga
ccagaccaagtgacaactgggatgcatcatagccagccaagctggagtacagacggattt
caacagcaccttatgcatgttagtcctccacctgcggttaatggccacggtagctgctca
actgcacagtcacatcctgcggctcgtcaaaattcaagttatgttgccggaaattctcat
acaagtcagggaaattctcttggacttcctgtcttgaccatgaatcaaaatggtagtcac
cttgcacctgctgctgctccaaatctaacttccggggtttttcctctgcaaggtcaatct
cttcaagggatgcaacagaaggaacaaatgttgaaggttaagagaaatgaaagtgatagc
ctaagtatccattctcatggcggtcaggtaaagactggtggtattagttcaagaagaggt
tatcatggttcacacggaaaagagttgaagaattcaagatttcataagccttctaccaac
cacctggggcagagaaatgacaaattcatgattagaactggtcaagtcaagaaaggtgtg
agaaacaacacattcttaaattccaaaggtcaagaagatcaaaagcgtaaaaggtccatc
cacttgacatacacagaggaagaaattctgcaatggcaagaagaacgaaaaagaaactat
ccaactactgcaaacattgagaaaaaggcaaagatgctgttggagatgcagaaagatggc
aaatctattgatgcaaatgccaagatacgacgtcgccagcaactcaaggagatcctagct
aaacaggcagagttgggagtggaggtcgctgagatacctccaggatatttatctgattct
caaaaaaactgtgcaagagggcataagaataaatttggcaggggttcattcaaaaacaag
tatggcaggaatactgaattgcgtggagatggcaaacaacttgaaagtttagatgataag
acctccccacggtcggtgttgaacagtagaaaaccaaccctcctgcaaaagttgttgagt
acagatatggaaagagacaagtctcgcttgctgcaagttttcaggtttatgaggattaac
tctttttttgagcattgcccagagatgcatctgcggttacccttggttactgcaagagat
tgtcagagcagttcgacgcctacagaatcgatagctttggcaaatgttcgcattggtggt
tatgatgatgataatgacgatgatgatgaaaatgatggggttggtaatgttggtccccaa
gacgatgggttggatgctactgtggctgtgatcaaggaagaacagaagatttctgatatt
attgaggatcaagaggagggagaaatcatagattag
DBGET
integrated database retrieval system
