Nymphaea colorata (blue-petal water lily): 116245812
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Entry
116245812 CDS
T07418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116245812
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116245812
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
Helicases
116245812
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
116245812
NCBI-ProteinID:
XP_031473240
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All DBs
Position
1:16891821..16898588
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AA seq
666 aa
AA seq
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MAATAAAAVQGLTRVRFSELRPQLSDQVLGVLEEEGFEFCTPVQVATIPLLCSFKDVCVD
AATGSGKTLAFVVPLVEIVRRATAQQPLKPHQVSGIIISPTRELSTQIYHVAQPFTSTVP
NFKTMLLVGGLDIKVDLKKIEEEGANLLIGTPGRLYDIMERVESLDFRSLEVLILDEADR
LLDMGFQKQISSIITRLPKQRRTGLFSATQTEAVEELSRAGLRNPTKVEVRTDAQLPADS
MAERSSSKTPLGLHIEYLECGAEVKPSHLVDFLYNNKQKKVIVYFMTCACVDYWGVVLPQ
LGLLKGCYIVPLHGKMKQTAREKALASFMELSSGILLCTDVAARGLDIPGVDWIIQYDPP
QDPNMFVHRVGRTARMGRPGSAIVFLLPKEEAYVDFLRIRRVPLEERKCSAAALDVVPQI
REAARKDRDVMEKGLKAFVSYIRAYKEHQCSYIFRWKELEIGKLGMGYGLLQLPSMAELK
HHNLSTDGFIPVENINLSEIKYKDKAREKQRKKKMLRKQELEHLEPKPDKPKTNVDTSKT
VTRKKTGRQRRAVQSMQDEDELEREYRLLKKLKKGKISESEFSKLMGLGDCLSGESELEE
SQISNPEMSESTKAVRRTGKNSKQHKGATKISSMASSRKESQDLRRSKLGGSHRHGKKGK
AQRQKK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccgccactgctgctgcagcagtccaggggctaacgagggttaggttctctgagctt
cggccccaactttctgatcaggttcttggagttctggaagaggaggggttcgaattttgt
acccccgttcaggtcgctactatccccttgctctgctcgttcaaggacgtttgcgtcgat
gccgctaccggttccgggaagaccctcgctttcgtcgtcccactcgtcgagatcgtccgc
cgagccactgcccagcaacccctgaagccccaccaggtttcaggaatcattatttcacca
acaagagaattgtccactcagatataccatgtcgcgcagccatttacttcgactgtccct
aattttaaaaccatgcttcttgttggagggttggatataaaagttgatttaaagaaaata
gaggaggaaggtgcgaatcttctcataggcactcctggaaggctatacgacataatggaa
cgcgtggaaagcttggactttagaagcttggaggttttgattcttgatgaggcagataga
cttctagatatgggtttccaaaagcaaatctcttccataataactcgtttaccaaagcaa
cgaagaactggtcttttctctgccactcaaacggaggctgttgaagagctatccagagca
ggattgagaaaccctacgaaggttgaagttagaactgatgcccagttaccagctgactct
atggcagaaagatcctcttccaagacaccattggggctccatattgagtatctcgaatgt
ggagcagaggtgaagccatcacatcttgttgattttctgtacaataataaacaaaagaaa
gtcatagtctatttcatgacctgtgcttgtgttgattactggggagttgtcttacctcag
cttggacttcttaaaggttgttatattgttccactccatggaaaaatgaagcagactgct
agagagaaagctttagcttctttcatggaattgtcaagtggtatcctgttatgtactgat
gttgcagcacgagggcttgacattccaggggttgattggataatccagtatgacccgcct
caagatccaaatatgtttgtgcaccgtgttggtcggactgcacgcatgggtagaccagga
agtgctatcgtattcctactgcccaaggaggaagcgtatgttgattttctacgtataaga
agagttcctcttgaagaaaggaagtgttctgctgctgctttagatgtagttcctcagata
cgtgaagctgcaagaaaagaccgtgatgttatggaaaagggactgaaggcatttgtatca
tatattcgtgcgtataaagaacatcagtgttcatatattttcaggtggaaagagctggag
atagggaagctaggaatgggttatggcttattgcagcttccttcaatggcagagttgaag
catcataacttgtcaaccgatggttttatccctgtggagaacatcaacttgtcagagata
aagtacaaagacaaagctcgtgagaagcaacgcaagaagaaaatgttacggaaacaagaa
ctggaacatttggagccaaaacctgacaaaccaaagacaaatgttgacacaagcaagaca
gttacaaggaagaaaacaggtaggcagcggcgggctgtgcagagtatgcaagacgaagat
gaattggaaagagaatatcgtttactaaagaagctgaagaagggaaaaatcagtgaaagt
gagttttcaaaactgatgggacttggtgattgcttaagtggggaatcagagttagaggag
tctcaaattagcaacccggagatgagtgagtccacaaaagcagtgagaaggacgggaaaa
aatagcaagcagcacaaaggagctactaaaatctcaagtatggcatctagcagaaaggaa
agccaagatctaaggcggagcaagttgggtggtagccataggcatggcaaaaagggcaag
gctcagaggcagaaaaagtga
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