KEGG   Nymphaea colorata (blue-petal water lily): 116245882
Entry
116245882         CDS       T07418                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncol03036]
    116245882
   03400 DNA repair and recombination proteins [BR:ncol03400]
    116245882
Chromosome and associated proteins [BR:ncol03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116245882
DNA repair and recombination proteins [BR:ncol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116245882
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_2 mTERF
Other DBs
NCBI-GeneID: 116245882
NCBI-ProteinID: XP_049931512
LinkDB
Position
1:28621809..28648497
AA seq 1260 aa
MAAEGEVFGEMASPSEWIPHVHAFVDLSLSQDHHDACLGKIVSFIKTDMLTLEILVKEME
MYLTTSDAVTRARGILLLAQVLVSLVSKPIDVAAVHSLIDFFTSRLADWQAIHGALIGCV
ALLRRYSAVGMVSTCDARNLAQSFLVNLQVQALAQADRKLCFELLECLLSAHPDALRPLG
DDLVYGVCEAIDEEKDPWCLLHCFRIVELLVDLFPDPSGPLASFSKDIFEILGRYFPIYF
THAKDDTLDVKREDLSRALMNALSSTPLFEPFCIPLLLEKLTSSLQIAKIDALKYLSHCV
IQYGSDRMSNHAKAIWLSLKDIIFTFSSSQEPVTSSTLELLENQSKENEVMKEALMCWAN
CVLVCDGSNEVFLPLMMQDSDVVMIFSSITGDYCWAHMSTECKKRLNALGSLVYVAAKVS
STCCTKVIESFFPRLMDLLGISSRDVPLDSVPEVNNSLSIKLNSGALFLCIELLTACRNL
AVDLVSRDVSSQCVPSQHGWFHLLQNFAEPLVLGLRFALSSAESTIIKNQAIEGTDGICV
VRCLQILATFPGCFSPLPEAVFGDILRSFILVIADSCREKALWKHSLKNLVQIGSSIEKF
GDPKRCISYKNIVVERSLSWPMHESSVPLSVKLEVLFDIGTTRVDFAVRILEGLKEILSS
NLIEALVKGNHVCAKIATSVLNCLSIRLLPWISTCGMAQLVSANLRTYTNSVVQIRELPC
SELWSFMTLLSACSPLSSMTCVDESLILPENLCKQNSCKSFREPSLISWFFDQDAGKESK
DEAFLLLSESLWLYLSTILEINLGLQEHGLFDALMLMMRLAVSYCTEEHQTLIVMKGYQI
LMAKTSFLHRDSCFFSASASEDIIRRTTASYFSLFDKWLVSLLASVVIALRPRVILPDVW
MLLKIFTVAVITGLEAAAQALGSMVNKWPTALDTDIVGACTLEDALDFILKIVCDSSRWN
NQSVKCVSLANIQKNITHINIDGGCFVDTHAVVGIAWITKGLVMRGHEKVKNMATFLLEC
LLSSGRVKHLTVQIDNGSFKDKSVESFEDKSFEASISAADAFQLISSDSEVSLNKIFHAS
IRPLYKQRFYASMMPLISHNIAESDFSVTRSLLYRALGHIICNAPLVAVLSESKKIVPLL
LDGLSTLSEEQLNKNLIYSLLLVLSGILVDEIGKEAVLDNMASIINNLVQLVSFPHMMVV
RETAIQCLIAISGLPQVQIFPYGRQVLKAIRRALDDQKRSVRQEAVRCHHAWASITSKVV
NT seq 3783 nt   +upstreamnt  +downstreamnt
atggctgcggaaggggaggtattcggagaaatggcgtccccgagcgaatggattcctcac
gtccatgcctttgttgatcttagcctctcgcaggatcatcacgatgcatgtcttggcaag
attgtttcatttataaagactgacatgttaacattagaaatcttggttaaagaaatggaa
atgtatttgaccacttcagatgctgtaacgcgtgcaagaggcattcttcttctagctcaa
gttctcgttagccttgtatcaaagccaatagatgttgctgcagttcatagcttgatagat
tttttcacgtctagattggcagattggcaggctatacatggtgcacttattggttgtgtg
gcacttttacgaagatatagtgctgttggaatggtttcaacgtgtgatgcaagaaatctt
gcacaatcttttctggtgaatcttcaggttcaagctctagcacaagcggaccgtaagcta
tgctttgaacttcttgagtgccttctgtctgcacatcctgatgcgctcaggccactgggt
gatgaccttgtttatggagtatgtgaagcaattgatgaagagaaagatccttggtgccta
ttgcattgctttcgcattgtggagcttctggtggatctgtttcctgatccatctggtcct
ctagcaagcttttccaaggatatttttgaaatattgggccgctattttcctatctatttt
acacatgcaaaagatgatacacttgatgtgaaaagagaggatctttcaagggctcttatg
aatgcattatcctctactcctctttttgagccattctgcattccactgcttcttgagaag
cttacttcatcattacaaatagctaagattgacgctttgaagtatcttagccactgtgtg
atacaatatgggtcggataggatgtcaaaccatgccaaagctatttggttatccttgaaa
gacataatctttacattttcatcatcacaagaaccagtaacctcatctactttggagctg
ctggagaaccaatccaaggagaatgaagttatgaaagaagctcttatgtgctgggcaaac
tgtgttctggtatgtgatgggtcaaatgaggtcttccttcctctaatgatgcaggacagt
gacgtggtgatgatattcagttccataactggggattattgctgggcacacatgtcaaca
gaatgcaaaaagaggttaaatgcacttggtagtcttgtatatgtggctgcaaaagtttca
tctacttgctgcaccaaggttattgaaagtttttttccacgcttaatggatttactgggt
atttcttcaagagatgttcctttggattcagttccagaggtgaacaactcactttccatt
aagttgaactctggagctcttttcctatgcattgaacttcttactgcatgtaggaatttg
gctgtagatttggtttctcgagatgtttcttcccaatgtgttccttctcaacatggttgg
ttccatttgcttcaaaattttgctgaacctttggtacttggtcttagatttgctttatca
tcagctgaaagcactattattaagaatcaggccattgaggggacagatggaatatgtgta
gtgagatgtttgcagatattggcaacgtttccaggttgtttttcaccactccctgaagct
gtgtttggggatattctgaggagctttattttggtcatagctgacagctgcagagagaaa
gccttatggaaacattctttgaaaaatctggtgcaaattggttcatcaattgagaaattt
ggtgacccaaaaagatgcataagctacaaaaatattgttgtcgagaggtctctatcatgg
cccatgcatgaatcttctgtacctctgtcagtgaagctggaggttctgtttgacattggc
accacgagggttgattttgctgtgagaatacttgaaggactgaaggagattctttctagt
aatctgattgaggctttggttaaagggaatcacgtttgtgcaaaaatagcaactagcgtg
ttaaactgcttgtcaattcggttgcttccatggatttctacctgtggaatggcacaattg
gtttcagcaaatctaaggacatatacaaatagtgttgttcaaatcagagagctgccatgc
agtgaactttggagctttatgaccttattatcggcttgttcccccttatcaagcatgact
tgtgttgatgaaagtttgatattacctgaaaatctttgcaagcagaacagttgcaaaagt
tttcgggaaccttctctaatttcttggtttttcgaccaggatgcaggaaaagaaagtaaa
gatgaagcttttctgctcctctctgaaagcttgtggctttatttatctactattctggag
atcaatctaggccttcaagaacatggtctttttgatgcattgatgttaatgatgcgactg
gctgtttcatactgcactgaagagcaccaaaccttgattgtcatgaaaggatatcagatt
ctgatggcaaaaacatcattccttcatagagactcgtgtttcttcagtgcttctgcatcg
gaggacattataagacgaactactgcttcctacttttctctgtttgataaatggcttgtc
tctttgctagcttcagtcgtaattgctcttcgtcctcgtgtgatacttccagatgtatgg
atgttattaaagattttcactgtggcagttattactggacttgaagcagcagctcaagca
ttgggatccatggttaacaaatggccaacagcattggacactgatattgttggtgcatgt
acacttgaagatgcattggacttcatattgaaaattgtctgtgacagcagccgttggaat
aatcagtcagtaaaatgtgtaagtttggctaacattcaaaagaatattacgcatatcaac
attgatggaggatgttttgttgacactcatgctgtagttgggattgcatggatcacaaaa
ggtttggtgatgcgaggtcatgagaaggtcaaaaacatggcaacgtttctgttggaatgt
ttgttatcaagtggaagagtcaaacatttgacagtacagatagacaatggcagctttaag
gataaatcagtagaaagcttcgaggataaatcatttgaagcctccatcagtgctgccgat
gcttttcagttaatttcttctgattctgaagtttctctaaacaaaatcttccatgcatct
attcgtccgctatataagcaacgcttctacgcaagcatgatgcctttgataagccataac
attgcagaatctgatttttctgtaaccaggtcacttttgtaccgtgctcttggacatatt
atctgtaatgcacctcttgtggcagttctgtcagaatccaagaagatagtcccattgctg
ctggacggtttaagcacattgagtgaagaacagctaaataaaaatctcatctacagtctt
ttgcttgttttgtctgggattttagtggatgagattggaaaggaagctgttttggataac
atggcttctatcattaataaccttgttcaactagtttcgttccctcacatgatggttgtc
cgtgagactgcaatacaatgtcttattgctataagtggactacctcaagtacaaattttt
ccttatggtagacaggtgttgaaagctattagaagggctcttgatgatcaaaagcgatca
gttcgccaagaagcagtccgctgtcaccatgcatgggcatcaatcacatcaaaagttgtc
taa

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