Nymphaea colorata (blue-petal water lily): 116245990
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Entry
116245990 CDS
T07418
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
116245990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncol04131
]
116245990
03029 Mitochondrial biogenesis [BR:
ncol03029
]
116245990
Membrane trafficking [BR:
ncol04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116245990
Mitochondrial biogenesis [BR:
ncol03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116245990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
Beta-prop_Vps41
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
116245990
NCBI-ProteinID:
XP_031473512
LinkDB
All DBs
Position
1:41550685..41559032
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AA seq
376 aa
AA seq
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MMSNAKPSPSSALPSSSSLSTQILSASFNQDGSCFAIGTTDGFKIFNAKSGRLCYERECG
ALCIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTVKGTALRDLNFLTSVLAVRVNKKRL
IVVLCDKAYIYDSNSLAILDTIDTVPNPKGLCAFSCSVDGCYLALPASTSKGSVLLYNAM
ELHSHCQIDAHQSPLAALVLSVDGTYIGTASEQGTIIRVHLVSQPAKSYNFRRGTYPSTI
TSLSFGSSKQAPNLLVATTSTGSVHVFSIGPVINRRPKRSVSLLTTIIPDKISDALDPGH
HFVLQNAIPAGVKSCATIHVNDEAFAGPSVTSRATSRASIFILSYNGYFQEYSLTLNDSG
ISTWKLEREFNLLIRM
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctaacgccaaaccttctccttcatctgcccttccttcttcctcctcactgtcg
acgcagattctctctgcttcattcaatcaagatggaagctgcttcgcaatcggaacgacc
gacgggttcaagatttttaatgccaaaagcgggagactttgctacgaaagagagtgtggt
gctctatgcattgtggaaatgctctacagctcaagccttcttgctattgttggtgctggg
gagcagccatcattatctccacgccgactttgtctattcaatacagttaaagggaccgct
ttgagagatctgaacttcttgacatcagttcttgccgttcgcgtaaacaaaaaaaggttg
attgttgtattgtgtgacaaagcatacatctatgattcaaacagtcttgcgatcctggac
acaattgacacggttcctaatccaaaagggctttgtgctttctcttgtagcgtggatgga
tgttatttggctcttccagcaagtacaagtaaaggatctgtgttgctatacaatgcaatg
gagctgcattcacactgtcagatagatgcccatcagtcaccattggctgcccttgttctt
tcagttgatggtacatatattgggacagcttctgagcaggggacaataatcagagttcat
ctagtttctcagccggcaaagtcatataattttcgaagagggacatatccatcaactatt
acatctttgtcatttggatcatcaaaacaagctccaaacttgcttgtcgcaaccacctct
actggttctgttcatgttttctccattggaccagttataaaccgaaggccaaagagatcg
gtcagtctgcttacaacaataattcctgataaaataagtgatgcacttgatcctggccat
cattttgttctccaaaatgctattccagctggtgtaaagagctgtgcaacaattcatgtc
aatgatgaagcttttgctggtccatctgttacatcacgtgccacatctagggcgtcaatt
ttcatcctatcatacaatggctatttccaggagtacagtttaactctaaacgattcaggc
atctcgacatggaagctggagcgtgaatttaatttactgataaggatgtaa
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integrated database retrieval system
