Nymphaea colorata (blue-petal water lily): 116246050
Help
Entry
116246050 CDS
T07418
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116246050
Transcription machinery [BR:
ncol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
116246050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
116246050
NCBI-ProteinID:
XP_031473597
LinkDB
All DBs
Position
1:complement(39369723..39374426)
Genome browser
AA seq
519 aa
AA seq
DB search
MGVFTVSGSASRGPLGFDLRFKTNNSYSLRKPLVLAFKSDQQIAQKPKSSSALSTSSEHL
PLAVESLETINHQPKKRRGRKPRKTANAAVIDIVEIDYDEAAAALENIYKLSPTHVPDME
LEAPRDRNRRKRSKKDQGTANSESDAGASGVVFNGRRRSKRLSLESRIALKNIKKEETTS
GSKLQDKRARETGDVDRLLREHSASTDLVSTDWKKMKIPPVLPSSEHTWLFKLMQPMKAI
LQVKENLERDLERTPTDVELATATNMSVPELRRQLQLGKAARNKLVKHNLRLVLFVINKY
YQEIASGSKFQDFCQAGAKGLIMAIDRFEPKRGFRLSTYGLFWIRHAIMRSLTLSSFTRV
SFGLESVRLEIQRAKLELLFELERMPTEEEIIEKVGISFERYHEVMRASKQVLSLNARHS
TTQEEFLKGVTDMEGVGFERRRSPAILRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRRYVM
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttttcaccgtctctggttcggcttcgcgtggtccgctgggctttgatttgaga
ttcaagacgaacaactcttattctctgaggaaaccgcttgttttagccttcaaatcggat
caacagatcgctcaaaaacccaagagttcttcggcattgtcaacttcgtcagaacacctg
cctttagctgttgagagtcttgagactattaatcaccagcccaagaagagaaggggcaga
aaacccaggaagacagccaatgcagctgttattgatattgtggaaatcgattatgacgaa
gccgcggccgccctcgagaacatatataagctgagccctacccatgttcctgatatggaa
ctggaagctccccgcgatcggaataggcggaaaagaagtaagaaggaccaagggactgct
aattcagagagtgatgccggtgcaagtggcgtcgtctttaatgggaggaggaggagtaag
cgcctaagcctagagagtaggattgctttgaagaatatcaagaaagaagagacgactagt
ggttccaaactgcaggacaagagagcacgagaaacaggggatgttgacaggcttctcagg
gagcactctgcttccactgatttagtcagcacggattggaagaaaatgaagatcccacct
gtacttccttcttccgagcacacctggctattcaaattgatgcagccaatgaaggctatt
cttcaagtgaaggaaaacttggagagggacctggaaagaacacccactgatgttgaactt
gcaacagccaccaacatgagtgtgcctgaacttaggagacaattgcaactgggcaaagct
gcaagaaacaagcttgtcaagcacaatcttcgcctggttttatttgtgataaacaaatat
tatcaagaaattgcaagcggttccaaattccaggatttctgtcaagctggggcaaaaggt
ttgataatggccattgatcggtttgaaccaaaacgaggatttcgtctctccacttatggc
ctcttctggatccgtcatgcaataatgcgatcattgaccctgtcaagctttacgcgtgtc
tcgtttggcttagaatctgtaagattagagatacaaagggcaaaactagaactactgttt
gagctggaaagaatgccaaccgaagaagagataatagaaaaggttgggatttcatttgaa
agataccatgaagttatgcgggcgtcaaaacaggtgctctctttgaatgcaaggcactcc
acaacacaagaggagttcctaaagggagtaacagatatggaaggagttggttttgagagg
cgtagatcacctgcaattctgagacttgctcttgatgacgtgttagactcattgaagccg
aaggaaagtttggtgattaggcaacgatatggacttgatggaaaaggtgacaggacactg
ggggagattgctggaaacctgagcatttcaagagagatggttcgaaagcatgaagtgaag
gcactcatgaagcttaagcatccagctcgagtcgattaccttcgcagatacgtcatgtaa
DBGET
integrated database retrieval system
