Nymphaea colorata (blue-petal water lily): 116246054
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Entry
116246054 CDS
T07418
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00040
Pentose and glucuronate interconversions
ncol01100
Metabolic pathways
Module
ncol_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116246054
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116246054
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116246054
NCBI-ProteinID:
XP_031473606
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Position
1:30198309..30203108
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AA seq
407 aa
AA seq
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MDPSTFLPSLQAFCVVLLISILNFSHCVAASETQIFHSSFDVVEFGAVGDGRTIDTTAFL
KAWEVACRTAGPVKLVIPYRRTFLLGPVYFNGNCRAHSIHVQILGNIVAPASPSSWAGQS
TSHWLSFYQVQNLVIDGTGTIDGRGSAWWDCKRRSDQALEIINCRRVKLSGITSLNSQGV
HVKIVFSQYVTVSNIKIIAPEESPNTDGINMGASQYVDIHDCNIQTGDDCIAMLGGSKFI
NISRISCGPGHGVSIGSLGRYSDMDIVEHVYVTDVNFYGTTNGARIKTWQGGNGLVTDVV
FKNLFFWRAQNPIIIDQFYCPNQKSCPIYREAVKIQGVSFIRAVGTTTSDVAINLKCSDT
VPCTDIVLKYVNLQAADPHEKTKAYCSNTRGWSSSIVLPRVPCLYSL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggatccttccaccttccttccttctttacaagccttctgtgtggtactattgatctcc
attctgaacttctcccactgcgttgctgcgtctgaaactcagatcttccattcgagcttc
gacgtcgttgagtttggtgctgttggtgacgggaggaccattgataccacggcgtttcta
aaagcatgggaagtagcatgccggacagcaggcccggtgaaactggtcatcccttacaga
agaaccttcttgcttggtccagtctacttcaatggcaactgccgcgctcattccattcac
gtccaaatactggggaacatagtcgcacctgcttctccttccagttgggcgggccagagc
acatcacactggctttctttctaccaagtgcaaaacttagtgatcgacggcacgggcacg
atcgacggccggggctctgcttggtgggattgtaaacgccgttcagatcaggctcttgaa
atcattaactgccggcgtgttaaattgagtggtattacctctctcaacagccaaggtgtg
catgtgaagatagtgttcagccagtatgttactgtctccaacatcaagataatagcacca
gaagagagcccaaacacagacggtatcaatatgggtgcctctcagtatgtagatatccat
gattgcaacattcagacaggggacgactgcattgccatgttgggtggttcaaaattcatc
aacatatccagaatctcctgcggaccaggtcacggagtcagcatcggaagcctcggcaga
tattcggacatggacattgtagaacatgtttatgtcactgatgtcaatttctatggcact
actaacggtgctcggatcaaaacatggcagggaggcaatggattggtgacagacgtagtg
ttcaagaaccttttcttttggagagcccaaaatccaatcattatcgaccaattctattgt
cctaaccagaaaagctgcccaatttatagagaagctgtgaaaatacaaggcgtgagcttc
atcagggcggtcgggacgacgacgagcgatgtggctatcaacctgaagtgcagcgacacc
gttccttgcacagacattgtgctaaagtacgtgaacttgcaagctgcagatccccatgag
aagacgaaggcctactgctccaacactcgagggtggtccagcagcatcgtcctcccccgt
gtcccctgtctatacagcctgtag
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