Nymphaea colorata (blue-petal water lily): 116246157
Help
Entry
116246157 CDS
T07418
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03082
ATP-dependent chromatin remodeling
ncol03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116246157
03083 Polycomb repressive complex
116246157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116246157
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116246157
Histone modification proteins
HAT complexes
HATB complex
116246157
HDAC complexes
Sin3A-HDAC complex
116246157
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116246157
PRC2.2
116246157
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116246157
Heterochromatin formation proteins
Other heterochromatin formation proteins
116246157
Chromatin remodeling factors
NuRD complex
116246157
NuRF complex
116246157
NuRF complex (fruit fly)
116246157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
116246157
NCBI-ProteinID:
XP_031473739
LinkDB
All DBs
Position
1:complement(26969142..26980233)
Genome browser
AA seq
521 aa
AA seq
DB search
MVLSGQGDVCLSGQALRCTPAHKIKPRYSAVAPLKRSVLRQERERERERESERMKERGKG
GQPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG
SVPNTLVIATCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKI
VATHTDSPDVLIWDVEGQPNRQAVLGASDSRPDLILTGHTDNAEFALAMCPTEPLVISGG
KDKSVVLWSIHDHISAAAVDSSSPKQGMVSGTAKQSSKSSGPNEKVLESPSVGPRGIFKG
HSDTVEDVTFCPSNSQEFCSVGDDSCLILWDARAGVEPAFKVEKAHNADLHCVDWNPHDQ
NLILTGSADNSVRLFDRRNLTSGGVGSPVQKFEGHKAAVLCVQWCPDKSSVFGSSAEDGF
VNIWDLEKVGRKKEYVGKKVPNSPPGLFFQHAGHRDKVVDFHWNTSDPWTIVSVSDDCGS
TGGGGTLQIWRMSDLIYRPEDEVLAELEKYKSHILSCSSKS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtgctctcgggccaaggcgatgtgtgcctaagcggccaagccctacgatgcacgcca
gctcataaaataaaaccacggtacagcgcagtggcgccactgaagcggagcgttcttaga
caagaaagagagagagagagagagagagagagcgaaaggatgaaggagcgcgggaaagga
gggcaaccctcggtggacgagaggtacacacaatggaagtctctcgtccccgttctctat
gactggctcgccaaccacaacctcgtctggccttccctctcctgccgatggggcccacag
ctggagcaagcaacttacaagaatcgtcagcgcctttacctctctgagcagactgatggc
agcgttccaaatactttggttattgcaacctgtgaggttgtaaaaccaagagttgcagca
gcagagcatatttcacagtttaatgaagaagcaaggtctccatttgtgaagaaattcaaa
acaattatccatccaggagaggttaaccgaattagagaactgccacaaaacagcaaaatt
gtggccacgcatactgacagtcctgatgtccttatttgggatgttgaaggacaacctaat
cgtcaagctgttcttggcgcttctgattcacgcccagacctgatcttgacagggcacaca
gataatgcagaatttgcacttgcaatgtgtccaactgaaccacttgtaatttctggagga
aaagacaagtcggttgtcttatggagcatacatgatcatatctctgctgctgcagtagat
tcatcatctccaaaacaaggaatggtatcaggcactgccaagcagtcatcgaaaagcagt
gggcctaatgagaaagtattagagagtccttcagttggacctaggggtatctttaaaggg
cacagtgatactgttgaagatgtgacgttctgtccttcaaattcccaggagttctgcagt
gttggtgatgactcgtgtctcattctgtgggatgctcgagcaggtgttgaaccagctttc
aaggtggagaaagcgcacaatgctgatcttcattgtgttgattggaatccccatgatcaa
aatcttattttaactgggtctgcagataattctgtccgattgtttgaccggcggaacctc
acatctggtggtgttggttctccagttcaaaaatttgagggtcacaaggctgctgttctt
tgtgtgcagtggtgcccagacaaatcatctgtttttggaagctctgcagaggatggtttt
gtaaatatttgggatcttgaaaaggttggtcggaaaaaggagtatgtaggaaaaaaagtg
ccaaactcccctccgggtttgtttttccagcacgctgggcacagagacaaggttgttgat
tttcactggaatacttctgacccatggactattgtaagtgtatccgatgattgtggaagt
actggtggaggagggactctacagatatggcgcatgagtgacttgatttacaggccagaa
gatgaggtactggcagagcttgagaagtacaaatctcacatcctgtcgtgttcgtccaag
tcctga
DBGET
integrated database retrieval system
