Nymphaea colorata (blue-petal water lily): 116246289
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Entry
116246289 CDS
T07418
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1-like isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116246289
Enzymes [BR:
ncol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116246289
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
Pre-60S particles
Helicases
116246289
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
116246289
NCBI-ProteinID:
XP_031473949
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All DBs
Position
1:10272274..10299868
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AA seq
519 aa
AA seq
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MVKKGVEVFEESMGQNKSEPFLPWMRNPVDVDSYEECTLEVVPYLDPRLVEALQKKGINS
LFPIQVAVWQETIGPGGWERDLCINSPTGSGKTLAYALPIVQMLSTRKLKHLRALVVLPT
RDLALQVSDVFSAIAPAVGLQVGIAVGQSSMAEEVSSLVQKPKFSMEFSCDPPDLCSSLT
SSVDILVATPGRLMDHIKTTKSFTLEHLCYLVIDETDRLLRDAYQSWLPTVLQLTQMNEQ
QMLRYEGSPTFGPLRTLRRLGPGRGLWNKRYPRVMKVTLSATLTRDPSKLSQLNLYHPLF
LTTGASGTRYQLPNQLESYKLICDLKMKPLYLFTLLQKLSGEKSIIFTSSVRSTHRLCTL
LNCFGELPSKISEYSSLQHQSVRSMTLDAFRAGDIQVIVASDAMTRGMDIEGVYNVINYD
MPPYIKTYVHRAGRTARAGRPGCCFTLLRKDEVKRFKKMLQKAGISKCSVYPLASDSIER
LMPVYSSALEKLKELADSEENKRASWRPAKTRDTVKVGK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaagggagttgaagtgtttgaggagtcaatgggacagaataaaagtgaacca
tttctgccatggatgaggaatccagtggatgttgattcttatgaagaatgcactctcgaa
gttgttccttacttagatcccaggttggtggaggctttacaaaaaaagggaatcaattca
ctctttccaattcaagtggcagtctggcaagagacaattggaccaggtggctgggaacgt
gacttatgcataaactcaccgacaggaagtggcaagacgttggcttatgctttaccaatt
gtccaaatgctctctactcgtaaattgaaacacttgcgggctttagttgtgctgcctact
cgtgatcttgcactgcaggtctcggatgtgttctctgctattgcacctgcagttgggcta
caagtaggcattgctgttgggcagtcttcaatggctgaagaggtttcatctctggtacag
aagcccaagttctctatggaattctcttgtgatccaccagatctctgctcatcactaaca
agttctgtagacatacttgtagccacaccagggcgattgatggaccatataaagaccacc
aaaagttttacactagagcatctttgctatctagtcattgatgaaactgatagattgctg
agggatgcatatcaatcttggttacctactgttcttcagctcactcaaatgaatgaacaa
caaatgctcagatatgaagggtcaccaacttttgggccattgagaaccttgagaagattg
ggccctgggagagggttgtggaataaaagatatccaagagtcatgaaggtaaccctttct
gctacattgacacgagatcctagcaagctttctcaacttaatctatatcatcctttattc
ttgacaactggtgcatctggaacacggtatcaactccctaaccagctagaatcttacaaa
ctgatctgtgatttgaagatgaagcccctttatttgtttacgcttcttcaaaaattaagt
ggagagaagagcattatctttacatcatctgtacgatcgacccacagactttgtacatta
ttgaattgctttggtgaattaccttctaaaattagtgaatattctagtcttcagcatcaa
tctgtgcgaagcatgacacttgatgcctttcgggcaggcgacatacaggtcattgttgct
tcagatgccatgactcgtggtatggatattgaaggggtctacaatgtcattaattatgac
atgcctccatatatcaagacatatgttcatcgggctggtcgcactgctcgtgcaggtcga
cctgggtgttgcttcacattactgaggaaggatgaggtcaaacgcttcaagaagatgtta
caaaaggctggtatcagtaagtgtagcgtatatccacttgcatcagattcgattgaacgc
cttatgcctgtttattcatctgcattagaaaaattgaaagagttagcagattcagaagaa
aacaagcgagcttcatggcgtccagccaaaaccagggacacagtcaaagtgggaaagtag
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