Nymphaea colorata (blue-petal water lily): 116246713
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Entry
116246713 CDS
T07418
Name
(RefSeq) E3 ubiquitin-protein ligase CIP8-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116246713
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116246713
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116246713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-RING_4
zf-rbx1
zf-RING_10
zf-RING_6
Zn_ribbon_6
zf-Nse
Sina_RING
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
116246713
NCBI-ProteinID:
XP_031474402
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All DBs
Position
2:complement(34339516..34343618)
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AA seq
195 aa
AA seq
DB search
MEQIDWHTVQSLRSKRHPKEDLELRLGHSLFSKGGTMTANCALRFPEPITIDDDDDDVQI
FSPRSFIEGRGMFSHSRSWAPVITEEDLELRLGFREYPKNKINIFEDGEDGGASVRQFDK
KKGAAGSSSRSMDMKVNLTCAICMDTMKEETSTLCGHIFCHSCITSAINLQKKCPTCRRK
LSTNNIHRIYLPGTS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaattgattggcatactgtgcagtcattgagatcaaagagacatccaaaagaa
gatcttgagttaagactaggtcattctttattttcaaaaggtggtaccatgactgctaat
tgtgctttaaggtttcctgagcccattaccatagatgatgatgacgacgacgtgcagatc
ttttccccgaggtcctttatagaggggaggggtatgttttctcatagtaggtcctgggca
ccagttatcactgaagaggatttggaacttcggctcggatttagagaatatccaaagaat
aagataaatatatttgaagatggagaggatggtggtgcaagtgtaaggcaatttgacaag
aaaaaaggtgcagctggatcaagcagtcgttctatggacatgaaggtgaatctgacatgt
gcaatctgtatggatacaatgaaagaagagacatcaaccctatgtggacacatcttctgt
cattcctgcattaccagtgccatcaatcttcagaaaaaatgtccaacctgcagacggaag
ctatcgaccaataacatacacaggatataccttcctggaacctcttga
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