Nymphaea colorata (blue-petal water lily): 116246737
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Entry
116246737 CDS
T07418
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116246737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116246737
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116246737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
116246737
NCBI-ProteinID:
XP_031474444
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Position
2:complement(3911899..3920833)
Genome browser
AA seq
941 aa
AA seq
DB search
MDENLEQNKLPELKLDAKQTQGFLSFFRSLPQDPNAVRFFDRRDYYTAHGDNATFVARTY
YRTTTVLRQISSGRDAISSVSVSKTMFERIARDILLERTDHTLEFYEGSGSNWRLSKMGT
PGNLGSFEDVLFANNDMDDSPAIVALSPIFRESECIIGLAYVDLTKRTMGIAEFLDDSQF
TNVESALVSLGCKECLLPAEISKTVEARHLNDALGRCNLLVTERKKAEFKSKDLVPDLGR
LVKDSVEPARDLVANLVYASGALGALLSYLELLADESNYGSYTIQHYKLDSYMRLDSAAM
RALSVLESKMDANKNFSLFGLMNRTCTAGMGKRLLNRWLKQPLVDVKEINYRLDMVQAFV
EDAALRLDLRQHLKRISDIERLMHRLQRRKASLQQIVKLFQSSLRLPYIKGAIERYEGEF
SSLLKSKYLDALDYWTDDDHLNKFIALVEAAVDLEQLENGEYMISASYDSKLLDLKNQMD
AVEKQIQILHKQTANELDLPVDKGLKLDKSTQFGHVFRITKKEEPKVRKKLNVSFIVLET
RKDGVKFTNTKLKKLGDQYGKLLEEYTSVQKELVARVVQTAATFSEVFESIAKILSEMDV
LLAFADLATSCPTSYARPEITPSDRGDIILMGSRHPCVEAQDGVNFIPNDCLLIRGKSWF
QIITGPNMGGKSTFIRQVGVNVLMAQVGCFVPCDQASISIRDCIFARVGAGDCQIRGVST
FMQEMLETASILKGATGNSLVIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHF
HELTALAHQHVNNDVDPQTKSTNGVANYHVSAHIDPSSRKLTMLYKVEEGACDQSFGIHV
AELAKFPEEVVSLAKEKAAELEDFSPISVLSESAKVGDKRKRVLDPDDMAKGAAIAHKFL
HEFSEMPLDKMDLKQALEQVSKMRSDLERDAVDNSWLQQFF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaacttggagcagaacaagcttccagagctcaagctagacgcgaagcagacg
cagggttttctgtcattcttccgctcgctgcctcaggaccccaacgcagtgcggttcttt
gatcgtcgggattattatactgctcatggtgacaatgcaacatttgtggctaggacatac
tatcggactactactgttctacggcagattagcagtggccgtgatgctatttcaagtgta
agcgtcagcaaaaccatgtttgaaaggattgctcgtgacattcttctggagagaactgat
cataccttggagttctatgaaggcagtgggtcaaattggaggttatccaagatgggcaca
cctggaaatcttggaagttttgaagatgtattatttgctaacaatgacatggatgattct
cctgcaattgttgcattgtcccctatctttagggaaagtgagtgcataattggtttggca
tacgttgatttgacaaaaagaacaatgggtattgctgaattccttgacgacagtcaattc
actaatgtggagtcagctctggtgtctcttggttgtaaggaatgcttattgccagcagag
atttctaagaccgtggaagcaagacatctgaatgatgcattgggaaggtgtaacttgctt
gtaactgagaggaagaaagcagagttcaaatcaaaagatttagtaccggatcttggtagg
cttgtaaaagattctgtggaacctgctagagatttggttgccaatttagtttatgcatct
ggggctcttggtgctttattgtcttacttggagctgcttgcagatgaaagcaattatggt
agctataccattcagcactacaaattggacagttacatgagattagattctgcagccatg
agggccctcagtgttctagagtccaagatggatgcaaacaaaaattttagcttgtttgga
ttgatgaataggacatgtactgctggcatggggaagagattactgaataggtggctcaag
caaccattagtagatgttaaggagatcaattaccgactggatatggtccaggcttttgtg
gaggatgctgcccttcgcctagatttgaggcaacatttgaaaaggatttctgacattgaa
aggctcatgcacaggcttcagagaagaaaagctagtttgcaacaaatcgtaaaacttttc
cagtccagcttgaggcttccttacatcaaaggtgccattgagagatatgaaggagagttt
tcctcgctattgaaaagcaagtacttggatgcattggattattggactgacgatgatcac
ttgaacaaatttattgctcttgtcgaggctgctgtagatcttgaacaacttgagaatggt
gaatatatgatttctgctagttatgattcaaagttgttggatttaaaaaatcaaatggat
gcagtagagaagcagatccagatcttgcataaacagactgcaaatgaacttgacctccct
gtggacaaaggtttaaagctggacaaaagcacacagtttggccatgtgtttaggatcaca
aagaaagaggagcctaaagttcgtaaaaagctgaatgtgagtttcatagtccttgaaact
cggaaggatggtgtgaaatttacaaatacaaagcttaaaaagcttggagaccagtatgga
aagttactggaggaatacacaagtgtgcagaaagagcttgttgctcgtgttgttcagact
gcagcaactttttctgaggtatttgagtccattgcaaagattctatctgaaatggatgtc
ttgcttgcttttgctgatcttgcaaccagctgtccaacatcatatgcaaggccagagatc
acaccatcggatagaggagatattatactgatggggagcaggcatccttgtgtagaggct
caagatggtgtcaattttatacctaatgattgtcttcttataagaggtaaaagctggttt
caaatcattactggtccaaacatgggtgggaaatctacatttattcgtcaggttggtgtg
aatgtgctaatggcacaagttggatgttttgtgccttgtgatcaagcaagtatcagcatc
cgagattgcatttttgctcgtgttggtgctggggattgccagatacggggagtgtccacc
ttcatgcaagaaatgttggaaacagcatctattttgaaaggtgcaactgggaactcactt
gtaataattgatgagcttgggcgtggtacatcaacatatgatggatttggtttggcgtgg
gccatctgtgagcatcttgtagaggtcactagagcaccaaccttgtttgctacacacttt
catgagctaactgcgttagctcatcagcatgtcaataatgatgttgatcctcagacaaag
tctaccaatggtgtggccaattatcatgttagtgctcacattgatccatcaagtagaaaa
ctgactatgctttacaaggttgaagaaggggcttgtgatcaaagttttggaattcatgtg
gctgaacttgcgaagtttccagaagaagttgtttcccttgccaaagaaaaagctgcagag
ttggaagatttttctcctatttctgttctgtcagaaagtgcaaaggtgggtgacaaacgc
aagcgagtgcttgatcctgatgatatggccaagggtgctgctattgcacacaagttcttg
catgagttctctgaaatgcccttggacaagatggatctgaagcaagctctagaacaagtt
agcaagatgagaagtgatctagagagggatgcggtagataattcttggcttcaacagttc
ttctaa
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