Nymphaea colorata (blue-petal water lily): 116246802
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Entry
116246802 CDS
T07418
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116246802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116246802
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116246802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
ARM_At3g06530
BP28CT
U3snoRNP10
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
116246802
NCBI-ProteinID:
XP_031474527
LinkDB
All DBs
Position
2:complement(14843818..14883516)
Genome browser
AA seq
2156 aa
AA seq
DB search
MATTLESQLKTIRLLVQGDSSAPKRPITRPSILFDPKEAADIDLETIFSIAISGLNILIE
TDERFRCYKNTLFSQKSLDMDREVMTVEENNKINSSISSYLRLLSGYLQLPSAQKTLEYL
IRRCKVHIYNVDELVMCILPYHDTHVFVCIVQILDLSKNKVWSFLEGVKSSGAPMPRKTI
VQQCLRDVGVLEAVCSYVMPEKKFLHSQTVVCFCMALIVEIVGSMLSLDNNMVKRVLPLV
FASLNSSIRSADYKAGAMMMVGVISSRAALAPGLVQDLIISLAKLAHQEAGEQGDLSWLH
MSLMGIINIVQSQSVKMLPWRCVKVLKEIREVPAVLSNLLKEYNIDKFLCFYMESLVHYC
SSDDSCHLALIGLIERIPMTNFIIALVSKLLAICAKGSRKITASDSLPESGVWAVKILLA
LDKQYPKELANAVHEFVKNPNTKCGDAAFESAGLMFDLGPKLPVEVSNLKLWFTLEHPRA
EVRRAALSDLAKAEKEKCISKKITVNVRESLLRRLHDDDLTVVQSALTVDGLCGLIDPAV
FIKALQDITLRCCNILKTGVTRFNAIACDIAVSCLTHGVNELEKCKASHKEIATIFFPLL
LVLPKTWKLNLRALELAKAVDWPFFKSLADNKDLETMKETKKLEIFASSVNMETIAVLSQ
NFTRHPARYIPWLMECCMVCELSMPFVLMIMLRSFMMQKKATRTAHFLGLFEACFPVLKS
EWLVVEANGVAMLADEVKLGELENIFSEYNIYCQIESKSEVVNANLIVSTCWVLLETFRI
WVHGDDKAKSQQYDHVFEDLFIFFATSQSKGLFKEHLRLLVTSCSLDPVLCLSNFYSDER
FPVPVQVESLNLLATLFSTLASTTEITVQNINFSSLQLAFPAVLVPLASAEQAVRAAAAD
CVERLYKLGCHINTSSKQNGNKIMLDDEFFLHSCWEVLELIMQQKKMICLDQNFFQLFMK
SLLSSRSDLLVPQDLDRRFDHDKKAEIMGFILRTAVNLPHHGKFVLLSMLKGVGNRLLFV
EETKLLLSDLLRRRSLYILGPLNHEQKLLEVETGILCVLLEGWSSMLCPSKEDIICENIF
KALKVDNTSKELVIVKPCLAVLRSLTTDFYDGLRTELQDELFQRLVNLARNENADIQKAA
KDVLMKVHVTSLTINRQLDLVQDHMKFHSCGASKKLKLQKEHDLNLFASEEGILHFLFSL
FDVLLLKKNLENRSSVIEVLIELLYKTSDSEWTSGVTSECNICYGARARLDASTPVDLIY
HIQQAILSVLDDIAASLLSNLLLEKPILKDINVDLLIKFMHRVEERTARNQAFTLITSLT
KLVPSQVLPHMIDICTMAGESTIKQDDTHSQCVFENVISTLVPAWLSNSNDVTKLLQIFI
EVLPQVSEGRRITLVTCLLRALGESKSLGLLLVLLVRSLVERMGRNLSTEDVSSSVFVEA
QWEYIFADQICLQYSCTVWLPSFLNLLNNIGTDNFSLQKASELQVAMRFILHKMEDTELM
FKVEAGHDSDNLQGMFSAVMEHVILHSQTSDLRMKKLRFPTTLRKELRRSTQLLLHTLMK
YMVPSAFFMGITKLVRHVEGNLRKKALELLCEYVKGDVLASKKPKTRKQTSKHLIASDLE
TDGYFSDMSREIIQLVDTASDCSVKLAAISAVEALSDKYPCDSSILLSCLTSVSKQIDSE
NMAISAGCLRSTSALISKLGVGALPLLPSVVAQVLERARDVTSTHNNATGDNNLAQSETS
YGSSLLLSVLTTLEALVVSVGGFLNPYLQDIIELLVFMSASDHKIKQQASTVRELLCEKI
SVRLILSPLMKIYPAAVNHGELSVSITFKMIAALISKMDRASVGTYHAKIFEQCLVALDL
RRRHPVSLKDVNTVEESVINAMVVLTMKLTEGLFKPAFCKTLEWADSELEEGSTGRKNID
RNIAFYKLVNKLAETHRSLFVPYFKYLTESCIHHLTDAEEQSSVSATQKRKKTKLRNSNQ
SGGDLKQLSSGQWHLRALVISSLHKCFLYDTGNLKFLDSSNFQALLKPLVSQLVVEMPAL
CDQNLVMPTVEEVDDLLVSCLGQMALTAGTDLLWKPLNHEVLMQTRSEKLRPRILGLRVV
KHLLDHLKEEYLVFLPETIPFLGELLEDADLEVKSLAQDILREMEKLSGENLRQYL
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atggctacaactttggagtctcagttgaagacaataaggttactagtgcaaggggattct
tcagcaccaaagcgtcctataactcgtccttccatcctatttgatccaaaagaagctgca
gatattgaccttgaaaccatattctctatagcaatttcaggcttgaatattctcatagag
accgatgagcgcttcagatgttataaaaatactctctttagccagaaaagcttggacatg
gatagagaagttatgactgttgaggaaaacaacaaaattaattcctcaatttcttcatat
ctgcggttgctatcaggatatctgcaacttccctctgcccagaaaacacttgaatatttg
atccgacgatgcaaggttcatatttacaatgttgatgaactggttatgtgtatattgcct
taccatgatacacatgtattcgtttgcatagtgcaaatattggatttgagcaaaaataag
gtttggagctttctggagggtgttaagagttctggtgctccaatgccaagaaagacaatt
gttcaacaatgtcttcgtgatgttggggttttagaagctgtgtgcagttatgtgatgccg
gagaagaagtttttgcattcacagactgttgtttgcttttgtatggctcttatagttgag
attgttggtagcatgctttcactagataacaatatggtaaaaagggttcttcctcttgta
tttgcatcactgaattcatcaatccgcagcgctgattacaaggctggtgcaatgatgatg
gtgggtgtgatatcaagtcgagcagccttagcaccgggtcttgttcaagatttgattatt
tcacttgcaaagctggcacatcaagaagctggagaacaaggtgacttgtcctggcttcac
atgtcccttatgggcattataaatattgttcagtcgcaatctgtcaaaatgctgccttgg
agatgcgtgaaagttctaaaagaaatcagggaagttccagcagttctaagtaatttgttg
aaggagtataacatcgacaagtttctatgtttttacatggaatccttagtccattactgt
tcttctgatgattcttgtcatctcgcattgattggactaatcgaaagaattcccatgaca
aattttatcatcgctcttgtttccaagttactagctatttgtgccaagggttcaaggaaa
ataacagcctcagattcactacctgaatcaggggtttgggccgttaaaatattgcttgct
ttagataagcagtatccgaaggaattggctaatgcagtgcatgagtttgttaagaaccca
aacacaaagtgtggtgatgctgcttttgagagtgcaggcttgatgtttgatctggggcca
aagttgcccgtggaggtatctaatttgaagctgtggttcacacttgaacatccaagggct
gaggttcgtcgagctgctttgtcagatttagctaaagctgagaaagagaaatgcatcagt
aagaagattacagtaaatgttcgagaatcattactacgtaggcttcatgatgatgatctt
actgttgttcaatcagctctgactgtggatgggttatgtggactgatcgatcctgctgtc
tttatcaaagctttgcaggatataaccttaagatgctgcaacattctaaagacaggtgta
acgagattcaatgctattgcatgtgatattgctgtgtcctgccttacccatggagtaaac
gagctggaaaaatgtaaagccagccataaagagatcgcaacaattttttttcctttgctt
ctggttcttcccaagacatggaagttgaatttgagggcattggagttggctaaggcagtg
gactggccgttctttaagtctcttgcagacaataaggacttggagaccatgaaggaaaca
aagaagcttgaaatttttgcatcttctgtgaacatggagactattgcagtcttgtctcag
aatttcacaagacatccagcgagatacattccttggttgatggagtgctgtatggtatgt
gagctgtcaatgccatttgttctcatgatcatgctgagatcctttatgatgcagaaaaaa
gctacaaggactgcacattttcttggtctgtttgaagcgtgttttcctgttctgaagtct
gagtggctcgttgtggaagccaacggtgttgcaatgcttgctgatgaggtgaagttggga
gaactggagaatattttttctgaatacaatatttattgtcaaattgagtcaaaatctgag
gttgtgaatgcaaatcttattgtttctacctgttgggtccttttggagacatttcgcatc
tgggttcatggagatgataaggctaagagtcaacagtatgatcacgtgtttgaggacctt
tttattttctttgctacatcacagtccaagggcttgtttaaggagcatctacgtttgctt
gtcacaagttgcagtcttgatcctgttctttgtttgtctaatttctattcagatgaaaga
tttccagtgccagtgcaagtcgaaagtcttaatttgcttgccactcttttttctactttg
gcatcaaccacagagatcacagttcaaaatatcaactttagcagtctccaacttgcattt
cctgcagttcttgtgccactcgctagtgctgagcaggcagtaagagctgctgcggccgat
tgtgtggaaaggctttacaaactcgggtgtcatataaatacttcatccaagcaaaatggg
aataaaattatgctagatgatgaattttttttgcattcatgctgggaagtccttgagttg
ataatgcaacagaaaaagatgatatgtctagatcagaatttcttccaattatttatgaag
tctttgttaagttctagatcagaccttcttgtgccacaggatcttgatagaaggtttgat
catgataagaaggcagagatcatgggctttatcttgaggactgcagtaaacttgccccac
catggaaagtttgtgttattgtcaatgctcaagggagtgggtaataggttgttatttgtg
gaggagacaaaacttctgttatctgaccttctgagaagacgcagtttgtacattttgggg
ccattgaatcatgagcaaaagctgttggaagttgaaactgggatcttgtgtgtgttgttg
gagggttggtcatctatgttgtgtccttccaaagaagatattatttgtgagaatattttc
aaagccttaaaggttgacaacacgtccaaggagttggtgattgtcaagccatgtttagct
gtattgcgaagtctcaccactgacttctatgatggtttgagaactgagttgcaggatgaa
ttattccaacgccttgttaaccttgctcggaatgaaaatgccgacatacaaaaagctgca
aaagatgttctcatgaaagtacatgtgaccagtcttaccataaacaggcagcttgacctt
gttcaagatcacatgaaatttcattcttgtggtgcatccaaaaaattaaagctgcaaaag
gaacatgatcttaatctgttcgctagtgaagaagggattctacattttctgttctctctg
tttgatgtcttgttgttgaagaagaatttagaaaacaggtcttctgttattgaagttctt
attgagcttctctataagacttcagacagtgagtggacttctggagttaccagtgaatgt
aatatatgttatggtgcacgtgctcgattggatgcttctacaccagtggacttgatctat
catattcaacaagcgattctatctgttttagacgacatagctgcttcattgctttctaat
ctccttttggagaaacctatcctcaaggacatcaatgttgatctcttaattaagttcatg
catcgggtggaggaacgcacggctcgcaatcaagcgtttacattgataacatctctcacc
aagctggttcctagtcaagtcctgcctcatatgattgacatatgtactatggctggtgaa
tctacaataaaacaggatgatacccattctcaatgtgtctttgagaatgtgatctccaca
ttggttcctgcttggctatccaactcaaatgatgtaacaaagcttctccagattttcatt
gaagtgcttccacaagtgtctgagggtcgacggatcacccttgtaacttgcctattgaga
gctttgggtgaaagcaagagtctgggtttactacttgttctccttgttcggtctctggtc
gagaggatgggcagaaatttgtctacagaggatgtgtctagttcagtgtttgttgaggca
caatgggagtacatatttgctgatcagatatgtctgcagtattcatgcacagtgtggctt
ccgtctttcctcaacttgttgaacaatattgggacagataattttagcctccaaaaagca
tctgagttgcaggttgccatgagattcatccttcacaagatggaggatacagaattaatg
ttcaaggtagaggccggacatgatagtgacaacctacagggaatgttcagcgctgttatg
gagcatgtgattttgcattcacaaacttctgacttgagaatgaagaaactgaggtttcca
acaactttaaggaaggagttgcgcagatctactcagcttcttctgcacaccctaatgaag
tatatggttccctcagcattttttatgggcatcacaaagttagtgaggcatgtggaagga
aatttaagaaagaaggctcttgagttgctctgtgaatacgtgaagggtgatgttctggct
tccaagaagcctaagacaagaaagcaaacaagtaaacatctgattgcttctgatcttgaa
acggatggatattttagcgatatgagtcgagaaattattcagttagtggatactgcaagt
gattgctcagttaagctggcagctatttcagcggttgaagctctgtcggataaatacccg
tgtgactcttccattttactgtcatgccttacctctgtctcaaaacagattgactctgag
aacatggccatatctgctggctgtctaagaagcacaagcgctttgatcagcaagcttggt
gtaggtgcattgccattgcttccttcagttgtggcgcaagtactagaaagagctcgtgat
gtcacaagcacacacaacaatgctactggggacaacaatttggcccaaagtgaaacttct
tacgggagttctcttctcttatctgttctaaccacattggaggcattagtggttagtgtt
ggtggctttttgaatccatatcttcaggacataattgagctgttagtattcatgtctgca
tcagatcataagataaagcagcaagcttcaaccgtccgggaactactttgtgaaaagatt
tccgttcgtctaattctttctccgttgatgaaaatatatcctgcggctgtcaaccacggg
gagcttagtgtatcaataactttcaagatgatagctgcattaatcagtaagatggacaga
gcatctgtgggaacttatcatgcaaagatctttgagcaatgcctggttgcacttgatctt
cgtcgcaggcaccctgtatccctgaaagatgtcaacacagttgaagaaagtgttattaat
gccatggtggtgctaacgatgaaactcactgagggtctatttaaacctgccttttgtaag
actctggaatgggcagattctgaactagaagaaggttctactggaagaaaaaatatagat
cggaatatcgccttctataagttagtaaataagcttgctgaaacacataggtctcttttt
gttccttatttcaagtacctaactgagagttgcatacaccatctaaccgatgctgaggag
cagtcttctgtttcagcaactcaaaagcgaaagaagacaaaacttagaaactcaaatcaa
agtgggggggatctgaagcaactttcttctggccaatggcatctaagagcgctggtcata
tcttccttgcataaatgcttcctttatgatactggaaatctcaaatttctagattcttca
aattttcaggcccttttgaagcctctcgtttctcaacttgtagtagaaatgccagcatta
tgcgaccaaaatctggtaatgcccacagttgaagaagttgatgatctactggtttcatgc
ctgggccaaatggccttgacagctggaacggacctcttatggaaacccctaaatcatgag
gtgttgatgcaaacacgtagtgagaagttacggccacgaatccttggactgagggtagtt
aagcatctgcttgatcatctcaaagaagagtatttggtcttcctgcccgaaacaatccct
ttccttggtgaacttcttgaagatgctgatcttgaagttaagtctctcgctcaggatatt
cttcgggaaatggagaagctcagtggcgagaacctccggcagtacctatga
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