Nymphaea colorata (blue-petal water lily): 116247041
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Entry
116247041 CDS
T07418
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116247041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116247041
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116247041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Hisat_C
Motif
Other DBs
NCBI-GeneID:
116247041
NCBI-ProteinID:
XP_031474847
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All DBs
Position
2:complement(11479005..11482775)
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AA seq
340 aa
AA seq
DB search
MFGAGSTSGAFGTPSTPAFSPSFGSTFFSSPATASPFSSQPQSSPFFQPQATPSLGFPTA
APAFSGTQLTTQMAPVAPLPFSLADRDIQAIVDAYKDEPGNTKYAFKHLLFSVTDPAARA
KPVGISDIMWAEAMAKLEGMESSDRERLWPQLVQGFKDLSNRLKLQDEALISDTERLRTT
QSNVKLLQRHLIADTLPWIQRLRQKEQGLQRRLLRAMRIIEALEGKGFRVPLTKGETLVA
EKLTTITRQLKGSGAELPRRIQNLLTVSRMHANANGFGSSAFLLGSTKIDDQSLADLQDV
LQQQTEAIERMGMVLKRDMRNMEIIMSDDTEMLENGDVES
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgccggatctacaagcggggcgttcgggacgccgtccaccccggcattttcc
ccgtcgtttgggtctaccttcttctcttccccggcgacggcctccccgttctcgtcccaa
cctcagtcctctcccttcttccaacctcaggcgaccccttccctcggcttcccgactgcg
gcgccggcattctccggcacacaattaaccacccagatggcacccgtagcacctctccct
ttctccctcgccgatagggacatccaggctattgtcgatgcatacaaggatgaacctggg
aacactaaatatgcattcaagcatttgttgttcagtgtgactgatccagcggccagagca
aagcctgtcggtatatcggacataatgtgggcagaagcaatggcgaagttggaaggaatg
gaaagctcagatcgtgaaaggctatggcctcagcttgtacaaggctttaaggatctttcc
aataggctgaagctgcaagatgaggcgttaatttctgacaccgagagactacggactaca
cagtctaacgtgaagctgctgcagcggcatcttatagcagacactcttccatggatacag
agactgaggcaaaaagagcaaggacttcagagaagactactgagggctatgagaataata
gaggcattggaaggcaagggttttcgagtgcctttgacaaaaggtgaaactctggtggct
gaaaaactaacaacaataacaagacagctgaaggggtcaggagcagaactacctaggagg
attcaaaatttattgactgtttctcggatgcatgcaaatgccaatgggtttggtagctct
gcatttcttcttggatcaaccaaaatagacgaccagagccttgcagatttgcaggatgtg
ctacaacaacaaacggaagccattgaaaggatggggatggttttgaagcgagatatgaga
aatatggagatcattatgtccgatgatacagaaatgttggaaaacggtgatgtagaatct
tga
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