Nymphaea colorata (blue-petal water lily): 116247065
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Entry
116247065 CDS
T07418
Name
(RefSeq) structure-specific endonuclease subunit slx1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116247065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116247065
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116247065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
116247065
NCBI-ProteinID:
XP_031474876
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All DBs
Position
2:complement(15896565..15898585)
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AA seq
344 aa
AA seq
DB search
MRKRGRPRSRPDTGIADPEGDDSDARKTRATLNARKRDFFACYLLCSLSPRFKGHTYIGF
TVNPRRRIRQHNGEITSGAWRTKRKRPWEMVLCIFGFSSNVAALQFEWAWQHPRESLAVR
DAASGLKSLAGIGGKIKLAYTMLTLPAWKGANLTVNFFSTKYTKLAAGCPALPDHMKMQV
APMDELPCYAEGIAHNDDDDDDDDDDDDEVGGIDTDSNATYERDNLGQVVGVANIANHLD
AEVCSHLDAEVGSISNNQMSITQFYKSRKSLRHTLSSEKKETSRSEIPSQSFSDEDQSCC
IISPPKARANVESTPTSSMVNFRNKSPSPLSIIDLTNSPDYIQL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcgcggtcgtccccgttcgaggccggatactggaattgccgacccggaaggc
gacgacagtgacgcgaggaagacgagggcaacgctgaatgcaaggaagcgcgatttcttt
gcctgctaccttctctgttctctatcccctaggtttaaggggcacacttatattggtttt
actgtcaatcctcgaagacgtatcaggcaacacaatggtgaaataacgtctggtgcatgg
agaacaaagaggaaacgaccttgggagatggttttatgtatctttgggttttcctccaat
gttgctgctctccagtttgaatgggcatggcaacatccaagagagtctttggctgtaaga
gatgcagcttcgggattgaaatcgcttgctggcatcggtggtaagattaagcttgcgtac
acaatgctcacgcttccggcttggaaaggtgccaacctgacagtgaatttcttctcaaca
aagtacacgaagctcgctgctggttgcccagcattaccagatcatatgaaaatgcaagtt
gcccccatggatgaacttccttgctatgcggaaggaattgctcacaatgatgatgatgat
gatgatgatgatgatgatgatgatgaggttggtggtatagatactgatagtaatgccact
tatgaaagggacaaccttggtcaggtcgtgggagtggctaatattgccaatcatctcgat
gccgaagtctgcagccaccttgatgctgaagtcgggagcatttcaaataatcagatgagt
atcacccagttttacaaaagcagaaaatcgttgcgacatactctttcctcagaaaagaaa
gaaacaagtagatctgaaattccttcacaatcttttagtgatgaagatcagtcttgctgt
ataatttcgcctcctaaagccagggccaacgtagaatcaacacccacaagctccatggtt
aattttcgtaataaaagcccatctcccttgagtattatagatttgacaaattcacctgat
tatattcaactatga
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