Nymphaea colorata (blue-petal water lily): 116247183
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Entry
116247183 CDS
T07418
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116247183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncol03021
]
116247183
Enzymes [BR:
ncol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116247183
Transcription machinery [BR:
ncol03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116247183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
116247183
NCBI-ProteinID:
XP_031475054
LinkDB
All DBs
Position
2:32121004..32153285
Genome browser
AA seq
1170 aa
AA seq
DB search
MGWHMADEQNPDEVKLPSLGKGCDTPPVKMKDIVAPVKSAVDKFQLLPEFLKVRGLVKQH
IDSFNYFVNEDMKKIIHTKGNEIVVSDVDPSFYVKYLDIRVEKPMRQLDYMVQELTPQIC
RLTDTTYAAPIKVDIEYTKGSTKGNRDIERKKDVVIGYLPIMLRSCRCVLSGLDEAELAR
KGECPLDPGGYFVVKGTEKVILIQEQLSKNRIMIDIDSKGSVVASVQSSTYERKTKTNIV
MNKDKIYLRHNILTEDVPVMVVFKAMGMESDQEVVQMVGRDPRFSSMLLPSIQDCAFLGI
HTEQQAIDYLEKKVKRFTMGNVQREKEERARDILLNVIFSNVPVYRYNFRQKCIYIAVML
RRMMEAVLNPEAIDDKDYVGNKRLELSGYMISILFEDSFKNMNFDLKRTIDHLLSKSNRS
SALDISQKIRKDIITQALERALSTGVWDVKRFRMSQKGVSQVVSRLSYIATLGHMTRIAS
QFEKSRKVSGPRALQPSQWGVLCPCDTPEGESCGLVKNLALLTHITTDEEEGPLISLCYS
LGVEDLALLSAEEIHSPGCFLVIFNGLILGRHRQPQHFSKAMRRLRRAGKIGEFVSVYVN
HKQSCIYIASDGGRVCRPLIIADNGVSRIKEHHMAALQLGLLSFDDFVREGLIEYLDVNE
ENNALIALYEGSKPEKNVTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGN
IAYNQLYRMDTLLYLLVYPQRPLLTTKTIELVNYDKLGAGQNATVAVMSYSGYDIEDAIV
MNKSSLDRGFGRCIVFKKSSAIVQKYGNQTSDRIARPPTGKSGKGGFDDSRFAVLDTDGI
AAPGEIIRPKDIYLNKQSPINTRDRFDHPMDLPDSAYKQSGLSYKGPLGETAVIDKVQLS
TDNNNNLCIKFLFRHTRRPELGDKFSSRHGQKGVCGVILPQEDFPFSERGICPDLIMNPH
GFPSRMTIGKMIELLGSKAGVSTGRFFYGSAFGEPSGHADKVECISQALVNCGFSYNGKD
FIYSGITGYPLQAYIFMGPIYYQKLKHMVLDKMHARATGPQVTLTRQPTEGRARDGGLRL
GEMERDCLIAYGASMLIMERLMTSSDQFQVHVCTKCGLLGYYNAKLKMSFCSTCKSGDKV
STMRLPYACKLLIQELQSMNIVPRLQLAEY
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcacatggcggacgagcagaatcccgacgaagtgaagcttccatctttgggc
aaaggctgtgatacacccccagttaaaatgaaggacattgtggctcctgtgaagtctgcg
gttgacaagttccagttgcttcctgagtttttaaaggtgagggggttggtgaagcagcac
attgattctttcaactacttcgtgaatgaagacatgaagaagataattcacaccaagggc
aatgaaatcgttgtgtctgatgttgatcctagcttctatgtcaagtacctagacataagg
gttgagaaacccatgcgacaacttgattacatggttcaggagctcactcctcaaatatgc
agacttacagatactacttatgctgcacctatcaaggttgatatagaatatacaaaagga
agcaccaaaggaaacagagatattgaaaggaagaaggatgttgtaattggatatttgcca
atcatgttacgaagttgccgctgtgtattgagtggattagatgaagcagaacttgcaagg
aaaggtgaatgcccccttgatccaggtgggtatttcgttgttaaggggacggagaaggtg
atcttgatccaagagcaactttcgaaaaacagaatcatgattgatattgatagcaaggga
agtgtcgtagcatctgtgcagagcagcacttatgagaggaaaaccaagaccaacattgtg
atgaataaggacaagatatatttgcggcataacatattgacagaagatgttccggttatg
gtagtcttcaaagcgatgggaatggagagtgatcaggaagtagtacagatggtcgggaga
gatcctagattttcatctatgcttttgccatctattcaggactgcgctttccttggaata
catacagagcaacaagcaattgattacctggaaaagaaggtgaaacggttcacaatggga
aatgttcaacgggagaaggaggaaagggcaagagacattcttctcaatgtcatcttctcc
aatgttccggtttaccggtacaactttcgtcaaaagtgcatttatattgctgtaatgcta
agacgtatgatggaggctgtattgaatccagaagctattgatgataaggattatgtgggg
aacaaacgtttggagttatctgggtacatgatatctattcttttcgaggattcattcaag
aatatgaactttgatctcaaaaggaccattgaccatcttctttcaaagtcaaatcgctca
agtgctcttgatatttctcagaaaataaggaaggatattattactcaagcccttgagcgc
gctttgtctactggtgtttgggatgtaaagcgattcagaatgagccagaaaggtgtttcc
caggttgtttcccggctgtcatatattgcaacactgggtcacatgacacgtattgcttct
cagtttgaaaagagtaggaaagtgagtggacctagagctctgcagccaagtcagtggggt
gtgctttgtccttgtgatacgcctgaaggagagtcttgtgggctggtgaagaatttggct
ttattgacacatattacaaccgatgaggaagagggtccattgatctctttgtgttacagc
ttaggtgttgaggacttggcattactttctgcagaggagatccattcaccaggttgcttt
ctggttatatttaatggactcattcttggtagacatcggcagcctcagcatttttctaaa
gctatgaggagattaagaagagctgggaaaattggtgaatttgttagtgtgtatgtaaac
cacaaacagtcctgcatttacatagcgtcagatggaggtcgtgtgtgtcgtccactcatc
atagctgataatggtgtctcgaggatcaaggaacatcatatggcagctcttcagctgggg
ttgctttcttttgatgattttgtacgggaaggattgattgagtatctggatgtgaacgag
gagaacaatgcattgattgctctgtacgagggaagtaagccagaaaagaatgtcacacac
attgaaattgagcccttcacaatattaggtgtttgtgcaggattgattccttttccacac
cataatcagtctcccaggaacacctaccagtgtgctatgggaaagcaagcaatgggcaat
attgcttataatcaactttatcgaatggacacactcctttacctgcttgtctaccctcag
cgacctttgttgacaaccaaaactattgagctggtaaactatgacaaacttggagctggg
caaaatgcaacagtagctgtgatgagttacagtggttatgacattgaagatgccattgtt
atgaacaaatcttctctggatcgtggttttggccgctgcattgtcttcaaaaagtcttca
gctattgtccaaaagtatggaaatcaaacatctgatagaatagcaaggcctcccacagga
aaaagtgggaaaggtggttttgatgattctcgctttgcggtgttggatactgatggtatt
gctgcaccgggtgagataataagaccaaaagatatttatttaaataaacagagccctatc
aacacaagggatcgttttgatcatcctatggacttaccagatagcgcgtacaagcaatca
ggcctgtcctataaaggtcccttaggagaaacagctgtcattgacaaagtccagttgtca
acggacaacaataataatctctgcataaagtttctttttcgccatacgcgtcggccggag
cttggtgacaaattcagcagtagacatggacaaaaaggtgtttgtggtgttattttgccg
caggaagattttccattttctgaacgtggtatttgccctgatctgattatgaatcctcac
ggatttccaagtcgaatgacaattgggaagatgatcgagctcttgggaagcaaggctggg
gtttcaacagggagatttttttatgggagtgcctttggtgagccaagcggccatgctgat
aaagttgaatgcataagtcaggcccttgtaaactgcggttttagctacaatgggaaggat
ttcatctattcaggcataactggatatccacttcaggcgtatatattcatgggaccaatt
tattaccagaagttaaaacacatggttcttgataaaatgcatgctcgagctacaggtcct
caagtaacattgactaggcaacctactgaaggaagggcccgtgatggaggcttacgttta
ggagaaatggagcgtgattgtttgatagcatatggggcgagcatgttgataatggagaga
ctgatgacctctagtgatcagtttcaagttcatgtttgcaccaagtgtggattattaggc
tattataatgcaaagttaaaaatgtcattctgctctacctgcaaatctggggacaaggtt
tctacgatgagacttccttatgcatgcaaacttctaatccaggaattgcagtcaatgaat
attgttcctcgtttgcaactcgctgaatattga
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integrated database retrieval system
