Nymphaea colorata (blue-petal water lily): 116247345
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Entry
116247345 CDS
T07418
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116247345
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116247345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
116247345
NCBI-ProteinID:
XP_031475344
LinkDB
All DBs
Position
2:18026603..18040711
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AA seq
825 aa
AA seq
DB search
MKRAFEELSDDEWENHSFQLSRVLKNQSQVKGHPHEHVMNGKSLPSIESFAFQKKKTECV
PLSLVEVQSSEEDDDFELGRQRVNRNRNKSVSMAPPYPQNLKDDNFKFCQSRKNVHKSSE
DDDDDFEIGKSRVNRNKKKPVPKSPQKPQSLEDDDFEVGGSKMIVNRSRRLVVVDDSDDD
TGIGGSDVAHLGAVEVGAVSDDSEGADEDDVVGNALQKCDKISATLRKELYGSASVPSTS
CEGYSEVEDSAAKIVTQADISAACADEDSDFEPVLKPYQLVGVNFLLLLYRKKIGGAILA
DEMGLGKTIQAITYLTLLKHLDNDPGPHLIVCPASVLENWERELQRWCPSFSVIQYHGAA
RAAYAKELNFLSKSGHPPPFNVLLVCYSLFERHSVQQKDDRRLLKRWKWSCVLMDEAHVL
KDRGSYRRKNLFSVAKNANQRLMLTGTPLQNDLHELWSLLEFMMPEIFETGDVDLKKLLN
AEDKEMIARIKSILAPFVLRRLKSDVMQQLVPKIQRVEYVTMVPEQDTAYRESINEYRAA
CEARAVKNSASAEQNSTSFLPQRQISNYFTQFRKIANHPLLVRRIFSDSDAVRLARMLHP
RGAFGFECTLERVISELKTYNDFALHKLLVSYGGSDAVGALEKKHVLGSAKCQALAELLP
SLKKAGHRVLIFSQWTTMLDILEWALDVIGVTYSRLDGSTQVAERQTIVDTFNNDTSIFA
CLLSTRAGGQGLNLTGADTVIIHDMDFNPQMDRQAEDRCHRIGQTKPVTVYRLVTKGTVD
ENIFEIAKRKLILDAAVLESGVELAAENEMPEKTMAEILSSILLG
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggcctttgaagaattgtccgatgatgaatgggagaaccactcgtttcaactg
tccagagttttgaaaaatcaatctcaagtgaaaggtcatccacacgagcatgtcatgaat
ggaaagtctcttccctcaattgaatcttttgcatttcagaagaagaaaacagaatgtgta
cctctatccttagttgaggtgcagagctcagaagaagatgatgattttgaacttggaagg
caaagagttaacaggaatagaaacaaaagtgtatccatggctcctccttatccccaaaat
ttgaaggatgataatttcaaattttgccaaagcagaaaaaatgtccataaatcctcagag
gatgatgacgatgattttgaaattggtaagagcagagttaacaggaataagaaaaaacct
gtaccaaagtcgcctcagaagcctcaaagtttggaggatgatgattttgaggttggtggg
agcaaaatgattgtaaatcggtctaggaggctggttgttgtagatgacagtgatgatgat
actggaattggtgggagtgatgttgcacacttaggagcagttgaagttggggcagtttca
gatgatagtgaaggtgctgatgaagatgatgtggttggtaatgctctccagaagtgtgac
aagatatctgctaccctgcgtaaggaactctatgggagtgcttcggtcccctcaacatca
tgtgaaggttactcagaagttgaggactctgctgcaaagattgtcactcaagcagatatt
agtgctgcttgtgctgatgaagattcagattttgaaccagttcttaaaccatatcagctt
gtgggagtgaactttctccttttgttgtatagaaagaaaattggtggagccatattggcc
gatgagatgggccttgggaagaccatccaggcaatcacatatttgactttgttgaaacac
ttggacaatgatcctggtccccatttgattgtttgtccggcctcagtcttagagaactgg
gaacgagagctccaaagatggtgcccatccttttcagtcatccaatatcatggggctgca
agagcagcctatgccaaggaattgaattttctttctaaatctggtcatccaccaccattt
aacgtgcttttagtctgctattctctttttgaacgacatagtgtacaacagaaggatgac
cgtagattactaaaacgttggaaatggagttgtgtgctaatggatgaagctcacgtcttg
aaggacagaggtagctaccgtaggaaaaatctgttttctgttgcaaaaaatgcaaatcag
cgcctgatgttgacaggaactcctcttcaaaatgaccttcatgaactgtggtccttacta
gagttcatgatgcctgagatttttgagactggagatgtggatttgaaaaagttgttaaat
gcagaagataaagaaatgattgcacgcataaaatccattttggcaccctttgtcttgagg
cgattgaaatcagatgtcatgcagcaacttgtgcccaaaatacagagggttgaatatgta
accatggtacctgaacaggatactgcttatagagaatcaattaatgagtatcgtgctgct
tgtgaagctcgtgctgtaaaaaattctgcttctgcagaacaaaacagcaccagttttctg
ccacaacgacaaatttccaactattttacacagttccggaagattgcaaatcacccactg
ttagtaaggcgaatatttagtgacagtgatgctgtcaggttagctcgaatgttgcatcca
aggggtgcatttggatttgaatgcacactagagagagtaatttcagagctcaaaacttac
aatgattttgcccttcacaagcttttagtttcttacggtggcagtgatgctgttggagca
ctggaaaaaaaacatgtcttgggctctgctaaatgccaggctctggcggagctattacct
tcacttaagaaagctggtcatcgcgtgcttattttcagccagtggaccacaatgcttgat
attttggaatgggccttggatgtcatcggagtgacctatagccgtcttgatggcagtacg
caggtggcggaaaggcagactatagtggatacatttaataatgacacatccatatttgct
tgtttattatcaacacgagcaggaggtcaggggctgaatttaacgggagcagatactgta
attatacatgacatggatttcaatccacaaatggatcgacaagctgaagaccgctgccat
cgcatcggccagacaaagcctgtgaccgtgtacaggcttgtcaccaagggaacagttgac
gagaacatctttgagattgcaaagcgcaaattgatcttggatgcagcagttcttgaatct
ggagttgagcttgctgcagaaaatgaaatgccagagaaaaccatggcggaaatattgtcc
tcaatcctactggggtga
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