Nymphaea colorata (blue-petal water lily): 116247583
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Entry
116247583 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116247583 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
116247583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncol02000
]
116247583
Transporters [BR:
ncol02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
116247583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
116247583
NCBI-ProteinID:
XP_031475620
LinkDB
All DBs
Position
2:complement(18778521..18833481)
Genome browser
AA seq
1292 aa
AA seq
DB search
MVRLRVHSMALLLLKGLFMASVVAAELLHSRLLAQSNASTTSTQKHAKEYCSMYGICAYR
SDGVPLNCPNSTSAVKPDALLSSKIQSLCPTISGNVCCTSSQFDTLRGQVQRAIPFLVGC
PACLRNFLNIFCELACSPNQSLFINVTSVVKVNNTLTVDGIDYFVTERFGQELLNSCKEV
KFGTMNTRAIDFIGGGAQTYQEWFTFLGRRAEPGSLGSPYSMRFQSMSSPASGMEPMNVS
VYSCGDTSLGCSCGDCPSSPVCSQLEPPAPHEKGSCSVKIGTLKVKCIELSLAIIYVILV
LSFFVWGYCQRIRRRRIASAQVKLLKVDDDSVHHSRSKHEEARHPIQAVEENPHFLRKLR
LPLVQRYISCFYRQYGYFVARHPIRVLSLSILVTLLLCLGLIRFKVETRPEKLWVSPGSK
AAEEKRYFDSHLAPFYRIEQLIIATTPSSSGIIQSIVTDKNIQLLFEIQKKVDSLQVNYS
GTTVSLTDICLKPLGKNCATQSVLQYFQMDPQKYRDSGVDHAFYCFQHYTSAQTCLSAFQ
GPVDPSTILGGFRENNYSEATTFVVTYPVRNAADTTGTENDKAVLWEKAFINLVKEELVT
LVSSHNLSLSFSSESSVQEELKRESAADAITILISYLVMFAYISVTLGDAPQLSSCIVSS
KVLLGLSGVVVVMLSVLGSIGFFSALGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQ
RKELPMEERLSNALVEVGPSITLASLSEVLAFAVGSIISMPACRVFSMFAALAVLLDFIL
QITAFTALIVLDFSRAEDHRIDCFPCIKLHSNSGSNKDSNLREPGLLERYMNEIHAPLLN
HMVVKIIILIVFIGFSFASIALCSRIQPGLEQQIVLPRDSYLQGYFKAVADYLKVGPPLY
FVVKNYNYSLGAQDTNKLCSISQCNSNSLLNEIAKAALTPESSYIAKPAASWLDDFLVWI
SPEAFGCCRKFTNGSYCPPDDQPPCCPSGSGSCGISEACKDCTTCFLNSELARGRPSTAQ
FKERLPWFLNALPSSDCAKGGRGAYSNSVDLEGYENGIIHASEFRTYHTPLNKQVDYVNS
MRAAKKFASVVSDSLKIEVFPYSVFYIFFEQYLNIWKTALINICIALGTVFIVCLVITSS
LWISTIILLVLAMIVLDIMGIMALLGIQLNAVSVVNLVMSVGIAVEFCVHITHAFVLSHG
DKAERMREALRTMGASVFSGITLTKLVGVIVLRFARSEIFVVYYFQMYLALVLIGFLHGL
VFLPVVLSICGPPSRHKVVESSQPSASTASSS
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggttcgccttagggttcattccatggctctgcttctgctcaagggcctgtttatggca
tctgttgtggcagcagagcttctccattcaagattgcttgcacagtcaaatgcatcaact
acatccacgcaaaagcatgcaaaggaatactgttccatgtatggtatttgtgcttatcga
agtgacggggtgccgctgaactgtccaaattctacttctgcagtgaagccagatgcctta
ttgtcgtcaaaaatccagagcttatgcccaacaatcagtggcaatgtgtgttgcacatca
agccagtttgacactctacgtggacaagtccaacgagccattcctttccttgtcggttgc
ccagcatgtttgagaaatttcttgaacattttctgcgagcttgcatgctcccctaatcaa
agcctttttatcaatgtgacttccgtagtgaaggtcaataacactcttaccgttgatggg
attgattactttgttactgaaagatttggtcaagagcttttgaactcgtgcaaggaggtt
aagtttgggactatgaatacccgagcaattgatttcataggaggtggtgctcaaacatat
caggaatggttcactttcctaggccgacgagcagaaccaggctctcttggttcaccatat
tctatgaggtttcagtcaatgtcttctccagcatcaggaatggaacctatgaatgtgtct
gtttattcatgtggtgacacatcattgggctgttcctgtggtgattgcccttcttctcct
gtgtgctctcaattagaacctcctgcacctcatgagaaaggttcctgctctgtgaaaatt
ggtactttaaaggtaaaatgcatcgagttatcactagctataatttatgttattttggtg
ttatcattctttgtgtggggatattgtcaaagaatacggagaagaaggattgcttctgcc
caagtgaaattgttgaaggttgatgacgatagtgtgcatcattcaagaagcaaacatgaa
gaggctaggcacccaatccaggctgttgaagagaatccacattttttgaggaagttaagg
cttcccctagtccaacgatatatctcatgcttttataggcaatatggttatttcgttgct
aggcatcctattcgtgtattatccttatccatacttgttacgcttctactgtgtttggga
ctaatccgcttcaaggtggaaacacgccccgaaaagttatgggtaagccctggaagtaag
gcagcagaggaaaaacgatattttgacagccatcttgcacctttctatagaattgagcag
cttataattgcaacaactccttcgtcttcaggaataatacagagtatcgttacagacaag
aatatacagctgctttttgaaattcaaaagaaggttgacagccttcaggtgaattattct
ggcacaacagtatccttgacagacatttgcttgaagcccttaggcaagaattgtgccact
cagagtgtgctgcagtattttcaaatggatcctcaaaaatatcgtgactctggtgtggac
catgctttttactgttttcagcattatacttctgcccaaacatgcttaagtgcattccaa
ggtcctgttgatccaagcaccatattaggagggttcagagaaaataattactcagaggca
actacatttgtggtgacatatcctgttcgtaatgctgctgatacaactggaactgaaaat
gataaagcagtattatgggaaaaagctttcataaatctagtgaaggaggagctcgtgaca
ttggtcagttcacataatctctccctttccttttcatcagaaagttctgttcaagaggaa
ctcaagagagaaagtgctgcagatgcaattacaatactaattagctaccttgtgatgttt
gcgtatatatcagttacattgggagatgcacctcaactctcatcctgtatagtttcctcc
aaggtgcttcttggtctttctggtgttgttgtggttatgttgtctgtacttggatctatt
ggatttttcagtgccctaggggtgaagtcaacacttattatcatggaggttatcccattc
cttgttttagctgttggagtagataatatgtgtattttagtacatgctgttaaacgccaa
agaaaggagttgcctatggaagaacgtcttagcaatgcccttgtagaagttgggccatca
ataacattagccagcctgtcagaagtactagcttttgctgttggaagcatcatttctatg
ccagcatgtcgtgtgttctcaatgttcgcagccttggctgtcctgctagatttcattttg
cagattactgctttcactgccctaatagtcctggacttttcaagagcggaggatcataga
attgattgctttccttgcataaaactacattcaaattctggatctaataaggattctaat
ttgagggagcctggcttattggagcgctacatgaatgaaattcatgcacctttactcaac
catatggtggtcaaaataataattctcattgtgttcattggtttctcctttgctagcatt
gccttatgttcaagaatacagcctggtctggaacaacagatagtcctacctcgtgattcc
tatctccagggttatttcaaagccgtggcagattacctgaaagttggtccaccattatac
tttgtcgttaagaactataactatagcttgggagctcaggatacaaacaaattgtgttcc
ataagccaatgcaattcaaattctctacttaatgagatagctaaagcagcattaacacca
gagtcaagctatatagccaagcctgctgcctcatggcttgatgattttctagtatggatc
tctccagaagcttttggttgctgtcgcaaatttacaaatggaagctactgcccacctgat
gatcagcctccctgctgtccatcaggtagtggatcatgtggaattagtgaggcatgcaaa
gattgtactacgtgctttcttaactcagaactagctagagggcgtccatctacagcacag
ttcaaggagagactcccttggtttcttaatgctttaccttctagtgattgtgccaagggt
ggtcgtggagcatactccaatagcgtggatcttgaaggatatgaaaatggaattattcac
gcttcggagttccgtacatatcatacaccccttaataaacaagttgattatgtaaattca
atgcgtgctgcaaaaaaatttgcttctgtggtttctgactcattaaagattgaagtattt
ccgtattccgtgttttacatattctttgaacagtatcttaacatatggaaaacggcattg
atcaacatttgcatagctcttggtactgtgtttatcgtatgccttgttattacctccagc
ttgtggatctcaacaatcattttactggtattagctatgattgtcttggatataatgggg
ataatggcgcttttggggattcaattgaatgcagtctctgttgtgaacctggtgatgtct
gtgggtattgcagttgaattttgtgttcatataacacatgcctttgtgttaagccatgga
gataaagcagagagaatgcgagaagcacttagaaccatgggtgcttcggtcttcagcggc
attacacttaccaaacttgtaggtgtgatcgttcttcgttttgcccgttctgaaatcttc
gtggtttattatttccaaatgtacctcgctcttgtccttattggattcttacatgggcta
gtattcttgccggttgtgttgagcatttgcggcccaccatcgagacacaaggttgttgaa
tcaagtcaaccgagtgcctccactgcttcttctagctag
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