KEGG   Nymphaea colorata (blue-petal water lily): 116247673
Entry
116247673         CDS       T07418                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
ncol  Nymphaea colorata (blue-petal water lily)
Pathway
ncol03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ncol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116247673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncol03021]
    116247673
Enzymes [BR:ncol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     116247673
Transcription machinery [BR:ncol03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     116247673
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF1153
Other DBs
NCBI-GeneID: 116247673
NCBI-ProteinID: XP_031475777
LinkDB
Position
2:29453636..29469109
AA seq 1180 aa
MGSKKMDIDIGHKISETDDLEENHQMDAVEASECGLKTSSSALSKYDLSKEELHKFLKDA
TVSFFNEWGLISHQLNSFNEFVDHGIHKLFDSLGEFQVSPDYNPSRKTFGGWRSAVVKFG
NVRIDKPSFCDEQGNTWPLTPSQARLQNLSYSSRIHAEINVQVFEDVKKNEKFKTGKEPY
RNAVTEKTCDVLIGRVPVMVKSSLCCLEKEDCDFDLGGYFIIKGSEKTFIAQERRCLRRL
WVSDKPTWMISYIPDEIKRRRIYIKLLGTSKGALAEVKIINVIFLYAAVPVWIMFFALGA
TSDKEIVDMLDLDTSDGSFSNIILSAIYDADEKCEDFRRSGRAMDYINGLIRKSKFPPSE
SMDECIDLYLFPALQSRRMKALFLGYMVKCLLLSYFGQRKIDNKDDFRNKRLELAGELLE
RELLLHVRNAGRRMIRALQRDLSKDLKSIDNYFDASIVTNGLHRAFSTGGWSHSYKRNER
CSGVVATLRRTNPLQTVSDMRKSRLQVQYTGKIGDARYPNPSYWGKVCFLSTPDGENCGL
VKNLAVTGLVSTSLLDVPLDKLVDCGMEDIDDSSLSSLHGRFKIFLNGEWVGLCEDSITF
VSNLKNLRRSLIINPQVEIKRDEQLMEIRIFSDPGRIMRPLLIVENNELAVSKEKIEKFR
SKNYSFSCLLEEKMIEFIGVEEEEDCRTAWGFAYLLDHKGQPAHYTHCELDLSFLLALSC
GIIPFANHNFARRVLYQSEKHSQQAIGFWTTNPNVRVDTLSHQLYYPQKPLFRTMISDCI
GKSEHFNGQNAIVAVNVHMGYNQEDSLVLNQTSLQRGMYRTEHYRSYKSEIDVVKVTGKR
FKVKEKVDFGKPLTGYGRVDSLEDDGFPFIGANLQAGDVVIGRVAESGEDHSVKLKHTEK
GKVQRVLLSANDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVVGFLDSQENFPFTREGI
VPDIVINPHAFPTRQTPGQLLECALGKGIASGGRMKYATPYAAASFDDITEQLHSLGYSR
WGNERVYNGRTGQRLKSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVSDRKRYG
GVKFGEMERDCLLAHGAASNLQERLFLLSDFSHMMICQKCSRVANVVLRSTTDRKVRGPY
CSFCKSIEHIVKINVPYGAKLLYQELFSMGICLKFKTELC
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgggtagcaaaaagatggatattgacattgggcacaagataagtgaaactgatgatttg
gaagaaaatcatcagatggatgctgtggaagcatctgaatgtggtctcaagacaagtagt
tctgctttatccaagtatgacttaagtaaagaggagctgcataagtttttgaaggatgcc
acagtgtctttttttaatgaatggggactgataagtcatcagctgaattctttcaacgaa
tttgttgatcatgggatacacaagctttttgattctcttggagagtttcaggtctctcca
gattacaatccatcaagaaaaacatttggtggttggcggagtgcagtggtgaagtttggc
aacgttagaattgacaagccttctttctgtgatgaacaagggaatacttggcctctcact
ccaagccaagcacgtcttcagaacctttcatattcatcccgtatacatgctgagataaat
gtccaggtttttgaagatgtgaagaaaaatgaaaaatttaaaactggaaaagaaccatac
aggaatgcagtcactgagaagacatgtgatgtgctgattggccgcgttcctgtgatggta
aaatcaagtctttgctgccttgaaaaagaagattgtgattttgaccttggaggttatttt
atcatcaaaggttcagaaaagaccttcattgcacaggaaagaagatgcttaaggaggctg
tgggtttcagataagccaacttggatgatatcttacattccagatgagataaaaaggaga
agaatctacataaaacttttagggacatcaaaaggagctttagctgaagtaaaaatcata
aatgtaatcttcctatatgctgcagttcctgtctggatcatgttttttgcgcttggtgct
acatcagataaggaaattgtcgacatgcttgaccttgataccagtgatggtagtttctca
aatataattctttcagcaatttacgatgctgatgagaaatgtgaagactttcgtcggagc
gggagggctatggattatatcaatggtctaataagaaaatcaaaatttcctccaagtgaa
tcaatggatgagtgtatcgacctttatttatttccagctcttcagagccgtcgtatgaaa
gctctttttctaggatacatggtcaaatgcttgctattgtcatattttggacaaagaaaa
attgacaataaggatgactttagaaataaaaggctagaattggcaggtgaattgcttgag
cgggagttattgctgcatgtgaggaatgctggaaggcgcatgatcagggctctgcaaaga
gatttgtctaaagatctgaagtcaattgataattactttgatgcttcaatagtgacaaat
ggcctacatagagctttctcaactggaggttggtcacattcatataaaagaaatgaaaga
tgttctggtgtcgtagcgacccttcgaagaaccaaccctctgcaaacagtgtcagatatg
aggaaaagccgcttgcaagttcaatatacaggaaaaattggtgatgcgagatacccaaat
ccttcatactggggcaaagtatgctttttgtccacacctgacggagaaaattgtggcctt
gtgaagaatttggctgtcacaggtcttgtcagcactagtttgttagatgtacctttggac
aaacttgttgattgtggaatggaggatattgatgacagttctctatcttcattgcatgga
agattcaagattttcttgaatggggagtgggtggggctttgtgaagattctattaccttt
gttagcaatctgaagaacttgcgccgaagtttgataatcaaccctcaggtggagattaaa
agagatgagcaactgatggaaatacgcatcttctcagatcctggcagaattatgcggccc
cttctaattgtggagaataatgaactggctgtgtctaaggagaagatagagaaattcaga
agcaaaaactattcatttagttgtcttctagaggagaaaatgatagaattcatcggtgtc
gaagaagaagaggattgtcgtactgcatggggatttgcatatctgttggatcataagggc
caacctgcacactatacccattgcgagcttgacctatctttcttgttggccttaagttgt
ggaattattccatttgcaaaccacaattttgctaggcgtgttctttatcaatctgagaaa
cattcccagcaagccataggtttttggacaacaaaccccaatgtcagggttgatactctt
tctcaccagctttactatccccagaaacctctttttaggactatgatttctgattgcata
ggaaaatctgaacacttcaatgggcagaatgctattgtggctgttaatgttcatatgggt
tataaccaagaggattcccttgttctcaatcaaacttcattacaacggggcatgtaccga
actgagcattatagaagctataaatctgagattgatgttgtgaaggtgacaggaaagcgt
tttaaggttaaggaaaaagtggactttggaaaaccacttacagggtatggtagggtggac
agccttgaagatgatggatttccattcattggtgcaaacctgcaagctggtgatgtagtc
atcggcagagttgcagaatcaggagaggatcacagtgttaagctgaaacatactgagaag
gggaaggtccagagagttttgttgtctgcaaatgatgaaggaaaaaattttgctgttgta
tctcttaggcaggttagatctccatgccttggagataaattttcaagtatgcatggtcaa
aaaggggttgttggattcttggactctcaggagaattttccattcactcgggaaggcatc
gttccagatatagtgataaatcctcatgcttttccaacaagacagactcctggccagttg
ttagagtgtgctttggggaaagggattgcttctggtggtcgtatgaaatatgcgacaccc
tatgctgctgcctcctttgatgatatcacagagcagcttcacagccttggctattcgaga
tggggaaatgaaagagtgtataacgggagaacaggtcaacgactaaaaagtttaattttt
atgggtcctacattttatcaaagactgattcacatgtctgaagacaaggtaaaattcaga
aacactggacctgtgcatccactcactcggcaaccagtatcggacagaaaaagatatgga
ggggtcaagttcggcgagatggaaagagactgcctgcttgcgcatggggcagcatccaac
ctacaggaacgcctgtttctcttgagtgatttctcccatatgatgatctgtcagaagtgt
tccagagttgcaaacgtggtcctacgcagcactacagatagaaaagtacgggggccttat
tgttcattttgtaaatcaattgaacatattgtaaaaattaatgtaccttatggagctaaa
ttgctttatcaagagctttttagcatgggaatttgtttgaagttcaaaacagagctgtgc
tga

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