Nymphaea colorata (blue-petal water lily): 116247685
Help
Entry
116247685 CDS
T07418
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116247685
04131 Membrane trafficking [BR:
ncol04131
]
116247685
04121 Ubiquitin system [BR:
ncol04121
]
116247685
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116247685
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
116247685
Membrane trafficking [BR:
ncol04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116247685
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116247685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
116247685
NCBI-ProteinID:
XP_031475797
LinkDB
All DBs
Position
2:16147787..16156983
Genome browser
AA seq
520 aa
AA seq
DB search
MLQIRLSKGPPGGPAPSEGGGSGSTGKSLPPPPESGVTVACPDHLVLADLPVAKSLGNPS
TSAQVKTVGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLVCARSDSSCYLCDER
IQKIQTIKLLEGIFICAAPHCLKSFLKRSLFEAHINETHADLLQLNPDREEPANENDGFM
ATSRPSSASSDVHPKPPLLPEPSASRAQSRPIAPTSHNAGILSSERDDKARRSQPKEQLP
PPPAVKQPPQLKPPLYGRAPDQQVDSAQHNFDRLPPPLPFNRFQQQQNNFDLPMGPPRKD
SEPFPEQQQESSSVQDYLPPQGPFPPAFPPSYAYPPPMPVSADGSQSFYYDASRTDLPSA
EGVPEQQGSLLGFPSVQSQGMYNFHESNYSRPWNMGVASGQSTSYEGLPGIPGAQGSYMH
DQSSDFSGARVPYFQGDSGRVMGAFTAGKGTESGGSAGSVGGADYQEGKGVLAPLPPPPP
LPLPPPHLKRGKFGGRPPDAGRDGYGWQHHDKRSYSGSQD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaattcggctgagcaaagggccgcccggtggtccggccccttctgaaggcggg
gggagtggatcaacagggaagtcgcttccaccgcctccggagagcggcgtgactgtggcc
tgcccagatcacctggtgctcgccgatctcccggttgccaagagcctcggcaacccatcc
acttctgcccaagtgaagaccgtcggcaggagatccaggcgccaactaggagagcgcgtc
catttctgcgttcgctgcgatttcccgatcgccatttacggccgcctgagcccttgcgag
catgctttctgcttggtttgtgcgaggagtgattccagctgctatctttgtgatgagcga
atccagaagatccagaccattaagttgctggagggtatattcatctgtgcagcaccacat
tgtcttaaatcctttctgaagaggtccctttttgaagcacatatcaatgaaacccatgca
gacctgcttcagctcaatcctgatagagaagaacctgccaatgaaaatgatggttttatg
gccacttctcgaccgtcttctgcctcatctgatgttcaccctaagccccccctcctgcca
gaaccttctgcatctcgtgcacagtcgaggcctattgctccaacaagccacaatgcaggt
atactttcttctgagcgtgatgataaagcacgtaggagtcagccaaaggaacagttgcca
cctccaccagcagtgaagcaacctccacagctgaagccaccattatatggccgagcccca
gatcagcaggtcgacagtgcacagcacaattttgatcggttgcctccaccactgccattt
aatcgctttcagcagcaacaaaacaattttgacctgccaatgggaccacctcggaaggat
tctgaaccatttcctgagcaacaacaagaatcttcatccgtccaagattacctacctccg
cagggtccatttccacctgctttcccaccctcgtatgcatatcctcctccaatgcccgtg
tctgcagatggtagtcagtcattttactatgacgcatcaaggacagacctgccatcagct
gagggagttcctgagcaacaagggtctttgctgggattcccttctgtccagtcacaaggg
atgtataattttcacgagagtaattattcacggccgtggaacatgggtgttgcttcaggc
cagagtacatcctacgaaggtctgccagggattccgggagcacaaggcagctacatgcac
gatcaaagctcagatttttctggggcaagggtgccatattttcaaggggacagtggtcgt
gttatgggagcttttacagctggtaaaggaactgagtcaggtggcagtgctggtagcgtt
ggaggtgccgattaccaggagggtaagggagtgttagcaccattgccgccgcccccacca
ttgcccttgcctcctccacatcttaaaaggggtaagtttggagggcgaccacctgatgca
ggccgggatgggtatggttggcagcatcatgacaaacgcagctatagtgggagccaagat
tag
DBGET
integrated database retrieval system
