Nymphaea colorata (blue-petal water lily): 116248243
Help
Entry
116248243 CDS
T07418
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116248243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116248243
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116248243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
116248243
NCBI-ProteinID:
XP_031476772
LinkDB
All DBs
Position
2:complement(18910959..18928810)
Genome browser
AA seq
1242 aa
AA seq
DB search
MGRIEQLPRSVYSSLQSGVYLFDLTRIVEELIYNSIDAGSTKVDVSLDLASCYVKVDDNG
HGISRNDLLLLGERNATSKLYHLDDTNAGVETLGFRGETLSSLSDISLLEVSTKVCGMPN
GYRKVIKDGKSVYLEIDDNRQEVGTTVICHEIYRKQPVRRKYLLTRSKKVLNLIKRCVLH
VALVQPWVAFKVVDIGSENELLSIHPSRSPLPLVTAYFGSDVSSTLNMVDFSKGELKLLG
YLSSPNLGFSTKAFQFFYINTRFVSKGLIHHLLNNLTAYFQLNWKNKFRCGNRTKQPFPF
QQTYPAYVLNLCCPISCYMISYESSKAVLKFKDWASIRSFTEAALRHFWGQSTEHLLQGE
SSVHKDDTSLSKANLEENNGVMNTSEEASENPTAMAKRYKVYHHNEPESYLSPLNDFVST
SILSPSFHERVLMNPPGQKVITGTSSHTSKNMISGGYGAGDADHGLQIQNIWQNDIILSC
ESSNASLMMESPLEWADESIEKHHISRLKWTECSSHVDSDSDSMRRRRKASRHEQSDYEK
VNGKFALQSNQNKRLKRAIPAASTCLEDMPNKSRTSSSHRKFEGQFDGSRTEMEWPSFSE
VNDYAHLESCVGNLDFFGNKKLQGQNSSHLLSFNMTKDDQTTKSLRMFRDDFSYPRRERH
SRKQTYSLESPDASSQHVNDLDGLYETIEVKHYHSSLCSDNVELNTKNYHLHDEYGHRSF
MCRSFNETKHAIGTIGTHKLAENSFNEDWLPNSSSKSADLEFWSWFDVGPNIESFRGSAL
ISGKNASSEKYYSVNKTRDRTLNHNGEDKGDRYSSAHAEHKQKEPMSQYYELEHMDNECT
HYVSKLRTKRSCSAPPHYPGKRKFSVLTSPPAATAACCRRKCLEQKYFPPEVVKQVTLST
GHPYIRKCTDEQHYTNMNKRKLYLGNCSFTEAIEGTLPTKWRNGEPESEEDLVNDVMMIE
NKHSASSDCLDGVLNISSGLLYLSGSCLVPESISKDYLEAAKVLQQLDRKFIPITAGGVL
AVVDQHAADERIRLEELHQNVLSGKGKSISYLEYGKELVLPEFGFQLLQNYTDQIRRWGW
ICDIHAENMCSFTRNLNILHQQAVKVTLIAVPCILGINLSDKDLLEFLDQLVDTDGSSSI
PPAVLRILNYKACRGAIMFGDTLLPSECSLIVDELKRTSLCFQCAHGRPTTVPLVNLEAL
HEQLNRLNSSGSGATESWHGLRRYEPSLERAKARLAAARNCG
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtatcgagcagttgccaaggtctgtatatagttcgttacaatcaggcgtgtat
ctgtttgatttgacaagaattgtggaggaattgatctataatagcattgatgcaggatct
accaaggtagatgtttctctagatcttgcttcatgctatgtaaaagtggatgataatgga
catggaatctcaaggaatgatttactgctccttggtgaacgaaacgcaacatctaagctc
tatcacttggatgatactaatgctggggttgaaaccttgggctttagaggagaaacactg
agttcactttctgacatctccttgctagaagttagtacaaaagtttgtggaatgcctaat
ggataccgtaaagtcattaaggatggtaaaagcgtctatcttgaaattgatgacaatagg
caagaagttggtactacagttatatgtcatgagatatatcgcaagcaaccagttcgaagg
aaatacttgttgaccagatctaagaaggttctcaacttgatcaagagatgtgtgcttcat
gtcgcacttgttcagccatgggttgcctttaaagtggttgacattggcagtgagaatgag
ttactgtcaattcacccttctcgatcgcccctaccactagtcactgcatactttggttca
gatgtttcttctactttaaacatggttgatttctccaaaggggaattgaagcttctgggg
tatctttccagtccgaatcttggtttctcaacaaaggctttccaatttttctacatcaat
acacggtttgtcagcaagggtctgattcatcatcttctcaataacctgacagcttatttc
cagttaaattggaaaaataaatttagatgcggaaatagaacgaagcaaccctttcccttt
caacaaacatatccagcatatgttctaaatctatgttgcccaatatcgtgctacatgatt
tcttatgaatcgtcaaaggcagttttgaaatttaaggactgggcttctattcgatccttt
actgaggctgctttgaggcacttttgggggcaatcgacggaacatcttctacaaggagaa
tcctctgttcataaggatgacacatctcttagcaaggcaaacttggaggaaaataatggt
gttatgaacacctcagaagaggcatcagagaaccccactgccatggcaaaaaggtacaag
gtttaccaccataatgaaccagagtcttatcttagccctctcaatgacttcgtgtccaca
tctatattaagtccatcattccatgagagagttttgatgaatcctccaggacagaaagtg
attacaggcacaagttctcacacatctaaaaatatgatttctggagggtatggtgctggt
gatgcagatcatggattgcaaattcaaaatatatggcaaaatgatattatcttgtcatgt
gagagttctaatgcgtcattgatgatggaatctcctctggaatgggcagatgagagcatt
gagaaacaccatatatcaagattaaaatggacagaatgttcatcacatgttgattcagat
agtgatagtatgagacgaagacgtaaggcatcaagacatgagcaatctgattatgaaaaa
gtgaacggaaaattcgccttgcaatcaaaccagaacaagagactgaaacgagctattcca
gcagcctccacatgtctcgaggatatgccaaacaaatcacggacgtcttcaagtcacagg
aaatttgagggacagtttgatggttccagaactgaaatggaatggccttcattttctgaa
gtaaatgattatgcacatcttgagtcttgtgttggaaatcttgatttctttgggaacaaa
aaattgcaagggcagaactcatctcatctgctatcattcaacatgacaaaggatgatcag
acaactaaaagtttgagaatgtttcgagatgatttttcttatccacgcagagaaagacac
tccagaaaacaaacttatagcctggaatcgcctgatgcatcatctcagcatgtcaatgat
ttagacggcttgtatgagactattgaagtgaaacattatcatagttctttatgttctgat
aatgtggaattgaacacaaaaaattaccatctacatgatgaatatgggcatagatctttc
atgtgtaggagttttaatgaaacaaaacatgcaattggcacaattggcactcacaaacta
gcggaaaatagtttcaatgaagattggttacccaactcaagtagtaaaagtgcagattta
gagttttggagctggtttgatgttgggcccaacattgaaagtttcaggggaagtgcattg
atttctggcaagaatgcttcttctgaaaagtattactctgttaacaagacaagggatagg
acactaaaccataatggtgaggataagggtgatagatatagctccgctcatgctgaacac
aaacaaaaagaaccaatgtctcagtattacgaacttgagcatatggataatgagtgtacc
cattatgtttctaaactgaggacaaagagaagttgctcagctccaccacattatcctggc
aagcggaagttctctgtcttgaccagtcctccagcagcaactgcagcatgttgcagaagg
aaatgcttggagcagaaatactttcctccagaggtggtcaagcaggttactttaagcacc
ggccatccatatatcagaaaatgcactgatgagcaacactacacaaacatgaataaacgc
aaattgtatcttgggaattgttcttttactgaagccattgaaggaactcttcccactaag
tggaggaatggggagcctgagtccgaagaggatcttgtcaatgatgttatgatgatcgaa
aataagcacagtgcatcatctgactgcttggatggtgtacttaatatatcatctggattg
ctgtacctttccggtagctgcttggtgcctgaatctatcagtaaggattatcttgaagct
gcaaaagtcctccaacagcttgatagaaaatttatcccaattaccgctggtggagttctt
gctgttgttgaccagcatgctgctgacgagcggattcgtttggaggagcttcatcaaaat
gtactctcgggtaaaggaaagagtatttcttacttggagtatgggaaagagctggtgctt
ccggagtttggcttccaactgctgcagaattatactgatcaaatacggcgatggggctgg
atatgtgatatccatgctgaaaacatgtgctccttcacaaggaacctgaacattctccac
caacaggctgtcaaagttactcttattgctgttccttgtatactggggatcaatttgtct
gataaagatctactagagtttctggatcagcttgttgatacagacggatcctcatcaatc
ccacctgctgttcttcgtatcctcaattacaaagcgtgcagaggtgctataatgtttggt
gacacgttactaccctcagagtgctctctcattgtggatgagttgaagcgaacctcactt
tgttttcagtgcgctcatgggaggccaacaactgttccattagttaacttggaagcccta
cacgagcagttaaacagactgaactcatctggcagtggcgcaacagaatcatggcatggg
ctacgtcgttatgagccaagtcttgaacgtgcgaaagcacggttagctgctgcaagaaat
tgtggttga
DBGET
integrated database retrieval system
