Nymphaea colorata (blue-petal water lily): 116248304
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Entry
116248304 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116248304 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116248304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncol03009
]
116248304
Ribosome biogenesis [BR:
ncol03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116248304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D3
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
116248304
NCBI-ProteinID:
XP_031476887
LinkDB
All DBs
Position
2:complement(14299865..14312996)
Genome browser
AA seq
1049 aa
AA seq
DB search
MELDTTNFKVEQLLKEVEVDYSLIKKSLGDALSAIEETVASIPEQKVDASLAPKFVGDLG
VPVDKVEFIFKKPETYQIVGSYAIEAVAKPVTNVDVLVRMPKSCFREKDFLDHRYHAKRC
LYLSVIAMHLKSCRIVRELQWSTFQNEARKPILVVHLGLDLGAASGFLVRIIPCTANVFA
ISKLGLSRNNIRSANQDSQASPNYNSSILEDMFLERTADFVKDIFLGWKDLSQALLLLKI
WVRNRSSIYTHDCLNGFLLSVILAYLTTDLGGARVRQSMKPIQIFRVTLDFLATSKLLDK
VLFLHSASQHNISEEEQRKYMQVFSFSLCDPFGFNLAFRMTRSALLELRDEARWTLNCMD
KQNDAGFEEVFVVRVDFAAKFDYCIRIYLKDDDDTKASKPCLDKELWRISEGNVYSLLVE
GLSDRAKFVRAVWRNVPPEWSLEDGLKGLGDGPLIVGIVIASSEKGFRLKDIGPNPENKE
EVIKYKKFWGSKVETRRFLDGTIAESVVWEFREWENHLIIKAIAEHILSSHLAIPKERIV
VVCDQLDFCLLNGSRDTISYSGDIGKAFDVLSKRLRSLEDLPLRISSVQLLDSASRRASV
FPPEPHPLAHEKDVRLGSRSAIPTCVQPMEVMIQLEGSGNWPLDSIALEKTKTAFLLKIG
ESLQKHWRMMCIATKDEVNVLLSGYAFHLRLLHERDRSLLKKQGMGTLIHNTTPVDNDLF
LQSCHSSMLNGLQGRYPIYGPVVRLAKRWVASHLFSNVLKEEAVELLVAYLFLKPFPFYA
PFSRVAGFLRFLRLLSEYDWAHTPLIIDVNGDLTLQDEAEINENFSQIRKSNEANADNEL
SALFLATKYDKKSEAWTKLSPSTTVLKRIVAYARSADSFVTEMILQGESGQKKWESLFRT
PLKNYDAVILLHEDKLAHPERLLFSSDLNLGMRPLVHGNGSKAFAPYLPLKDLISNPQEA
KKKLMVNFDPAKCLVEDIKQEFPGIFGLWYDALSGDAIGLTWENPSKRRKIEGNGASTAQ
GSIELLKRVGDAGKGLVKSIYLLRPPRNH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagttggacacaacaaatttcaaggtggagcaactcctgaaggaggttgaagtggat
tattcgttgatcaagaagtcacttggtgatgccttatcggctatagaagaaactgtggct
agcattccagagcagaaggttgatgctagtctagcacccaaattcgtgggggaccttggt
gtacctgttgataaggtagaatttatattcaaaaagccggaaacctatcaaatagttgga
agctatgcaattgaagcagttgcgaagccagttacaaacgttgatgtgcttgtacgcatg
cctaagagctgcttccgcgagaaggacttcttggatcacagataccacgcaaaaagatgt
ttgtacctctctgttattgcaatgcatttgaaatcatgcagaattgtccgtgaactacag
tggtcaacctttcagaatgaggcgaggaaaccaattttggttgtacatctaggtcttgat
cttggggcagcgtctgggtttcttgtaaggatcatcccatgtacagctaatgtatttgca
atttcaaagttaggtttaagccgtaataacatccgctctgcaaaccaagattctcaagct
tcacccaattacaacagtagcatattggaagacatgtttttggagagaactgcagatttt
gtcaaagatatttttcttgggtggaaggacttgagccaggcattactcctgttaaaaatt
tgggttagaaatagaagttccatatatacccatgactgcttgaatggtttcctgctgtct
gttatactagcataccttacaacagatcttggtggggctcgtgtcaggcagtctatgaag
ccaatccagatatttcgggtgactttggacttcttagccacctcaaagttgttggacaaa
gttttgtttcttcattcagcatcccagcataatatttcagaagaggaacagaggaagtat
atgcaggtatttagtttttcattgtgtgatccatttggttttaaccttgcattcagaatg
accaggagtgccttgctggagcttcgggatgaggccagatggacgcttaattgcatggac
aaacaaaacgatgccggttttgaagaagtttttgtagtcagggtagactttgctgccaag
tttgattattgtataaggatatacttgaaagatgatgatgataccaaagcatcaaaacct
tgcttggataaggagctgtggaggatctctgaggggaatgtttactctcttttggtagaa
gggctcagtgatagggcaaaatttgtccgggcagtttggagaaatgtgccccctgaatgg
agtttagaagatgggctcaaagggcttggtgatggacccttaattgttgggatcgtgatc
gcttcttctgagaagggtttccgattaaaagatattggcccaaatccagagaacaaagag
gaggttattaaatacaaaaaattttggggatctaaagttgagacacgacgttttctagat
ggaactattgcagaatctgtagtgtgggagtttcgtgaatgggaaaatcatcttataata
aaggcaattgctgagcatattctttcttcccatcttgccattccgaaggagcggattgtt
gttgtttgtgatcagcttgatttttgtcttctaaatgggtcaagagacacaatttcatac
tccggtgatatcggaaaggcatttgatgttctatccaaacgtttgcggagcctagaagat
ctccctttgcgaatctctagtgtgcagctattagactcagcatctcggcgcgcatcagtc
ttccctcctgaacctcatccccttgctcatgaaaaggacgttaggcttggaagcagaagt
gccattccaacttgtgtccagccaatggaagttatgattcagttggaagggtcaggaaat
tggccattggatagtattgcattagagaagacaaagactgcttttcttctcaagattgga
gaaagtttgcagaagcactggagaatgatgtgtatagctactaaagatgaggtgaatgtc
ctactgtcaggctatgcatttcatcttagacttttgcatgagagagatagaagcttgctg
aaaaaacaaggaatgggcaccctaatacataacacaactcctgtagacaatgatctgttt
ctccaaagttgccattcttctatgttgaatggtttgcaaggacgataccctatctatggg
ccagttgttcgccttgccaaacggtgggttgcgtcccacttattttccaatgttctgaaa
gaggaagcagttgaattgctggttgcttacttgtttctgaagccttttccattttatgct
ccattttcacgggtagctggatttttaagatttctgcgtttgctgtctgagtatgattgg
gcccacaccccattaataattgatgtaaatggtgatctcacgttacaagatgaagcagaa
ataaatgaaaatttcagtcagatcagaaaatctaatgaagcgaatgctgataatgaacta
tcagcactgttcttggccacaaagtatgataagaagtctgaagcttggacaaagttatcc
cctagtacaacagtcttgaaaagaattgtcgcctatgcccgtagtgcggacagttttgtg
acagagatgattttacagggcgagagtggccagaagaagtgggagtctttattcagaact
cccttgaagaattatgatgctgtaatcttgcttcatgaggataaacttgcacatccagag
cgtctccttttctcctccgacctcaatttaggcatgaggccgcttgttcatgggaatggt
agcaaggcctttgccccatatctcccgctgaaggatctgattagcaatccccaagaagca
aaaaagaagctgatggtaaacttcgatcctgcaaagtgtcttgtagaagacataaagcaa
gagtttcctggtatttttggattgtggtatgatgccctcagtggtgacgccattggcctg
acgtgggagaatccatcaaagaggaggaaaatcgaaggtaatggtgcttcaactgcgcag
ggatccattgagcttctcaaacgtgtgggtgatgctggtaaagggttggtaaaaagcatt
tatcttctaaggcctcctagaaatcactga
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