Nymphaea colorata (blue-petal water lily): 116248760
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Entry
116248760 CDS
T07418
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116248760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncol03019
]
116248760
Messenger RNA biogenesis [BR:
ncol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116248760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoprot-TPR
TPR_MLP1_2
TPR
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
116248760
NCBI-ProteinID:
XP_031477589
LinkDB
All DBs
Position
1:complement(26200625..26239758)
Genome browser
AA seq
2059 aa
AA seq
DB search
MPLFITDEDLRSCGDNAALVAEKADAYIRELQRQLETCKSQADAAAITYEQSCALVEQKY
VTLSSDYAQLEARTAQLSAALDEKIQEVARIQSEKHQLNLKDVTKDSEIEKLSLQVSEMH
KSKRQLLEMIDQKDIEINDRAALAKSYLDKIINLTDDANLKDAKFHDCEAELARCQAAHA
RVLQEKELLERHNQWLNEELTSKVDALLELRRSSTENEADLSFKLAEVEKQLNETSRCLS
TTKERMKDLEEKLTSTQEELCCCKNAAASNEQQFSAEIATATKLVELYKESTEEWSKKAA
ELEGVIKALETHLSQVEDEFKEKLNQQVSEKNGLEKEASELREKLNKCELELENARKANE
LDLPMFSLSVDHMDTGERNADLCDGGEKMLVPRIPIGVSGTALAAALLRDGWSLAKMYAK
YQETVDALRHEKLGRKQSQAILEKVLSEIEEKAEIVLEERAEHEKMVEAYNVLENKLQKS
LSDQAIFENSIRELKVELRRHERDLGSAEKEITDLESQVTILLKECHDIQLRCGVPSTIL
SDNTIGPRGESIGIESRMDNSPHLMPFKNINGLVEQNVKLRGRVHSLEHQKDEREAELKE
VFEMEMRKREDEAASKVAIVLSRAEEQGHMIESLHTAVGMYKRLYEEELKRRGGTPNTYT
EEHIPAEVGWKENYLNTEISQDANKKGDDKSSARIKDLEEDLLKARNEVASLQLERDKLV
MEAKFEHERFERFLKEFEDLRKEVTAMQSRNVELSQLIIDHQRRLRESSQSVQSSEELSR
KMSMQVSALQHEKDLLLNSEKRALDEVRALSERAHRLQASLDAFHSIEEVRENARIAERR
KLEGDLQRVQKEWAEAKQELQDERKLVQNLTRDREQTVRTAMQQVEDMRKELAEALRNVA
SAEARASISETRCIDLEARLKRFENLANANAGPGHPVPAVDDDFLDIDKMKEEMRSLREE
AQSSKEHMLQFKEIAQVNEEALKQIEVAHNSFKAEAEKIKTSLESEIVSLRERISELESN
LAARGLEFSSTISEKDAALSSALTEISSLKEKNSALNSQKEELEIWIASLKDDLEREHQR
WRSAQDNYERQVLLQSEAIQELRKTSDALTALQVEAAELRKQADSLRTENEILKRTWETE
KVELQKLKDEAELKYIEINEQNNILLNRLGAVNVQIAEERTLSCLSAEGSVSETKGEGDL
QTVINYLRRSKEIAETEISLLKQERLRLQTQLESALKASETAQSMLQAERANTRSRVYSD
EEFQSLQLQVREINLLRDSNVQLRAENQHNFEECQKANEVAQKAKSESDHLATLLREKEV
ELEAVKKQVDMQKEEIGLWEKRNSEIVSSYKNLDMEDYEQMKENFKDMQEKLKTMEVELQ
ESQSLLVKKKENVSDLEQEIANKELKLNEMQKQLQDVTANVEILKSKEQKQKHTILHWKR
RTEELSREKDELFKEKQAISKQLEESRAVGKRSLGEAAKQHEVAARQELAAHHDQALKEK
DTRIQSLEKILERAREDLQKERDELRREKAVRVKDRKTFMELAQKSVQAKKELEEKLDKH
KHQRESLIESGVPTTVLPSDVELDEKMTNYLQCVDQVEEAANLLSSDVLASQSVSSSISV
HAESVPGNERKTGRLVGAVSSTTHPVYPPASVHPPQIKDADEKTDKSNVPKPVAETRKPG
RKLIRPQLGEDQAAHPSTREVHRERSEPASEILPSLEQSEHVAETEVAEMETESNLEEGR
SVAINPELSNEGMEMSGRKRVLDSSSSDLQEGFVHQDAKKPKHSDSSHEDIDGGANKLSD
NPDLPLSGPDAIAPESNEPEIFYASKAGDMEIENEPAMASVEAVVVSDLETANVEPGDAV
EALDGPVDADDSFEGGNVVAKDTPVAIDEEREEGEFVSDSAQDIDETANPEQSQTPSESC
AAGSDAEDEPEGTVNMKNTEVTSSVLTDDPKEVATSTPTEHSTNDTPALLQDPVASGASD
TSDPNVKKQASPGEVSESKDRETSTGRTVINIPERARMRAIARSSGIASSPSGRGRGRTS
RGSLKKDTGAGRGGRGARR
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcatcacggatgaagatctccggagctgcggtgacaacgcggcgcttgtg
gccgagaaggccgacgcttacattcgggaactgcagaggcagctcgagacatgtaaatct
caggccgacgctgcggcaatcacctacgagcagagctgcgccctcgtcgagcagaaatat
gtcacgctgtcctccgattacgcgcagttggaggcgcgcaccgcgcagctgtcggctgcc
ctcgacgaaaaaatccaggaagtcgcgcgaattcagtcggagaagcatcagctcaatctc
aaggacgttactaaagacagcgaaatcgagaaattatccctccaagtatctgagatgcac
aagtcgaagcggcaattgttggaaatgattgaccagaaggatatagagatcaatgataga
gctgcgttggccaagagttacttggacaagattattaacctcactgatgatgccaatttg
aaagatgcaaagtttcatgattgtgaggcagagttggcaagatgtcaagcggctcatgct
cgtgttttgcaggaaaaggaacttcttgagagacacaaccagtggctgaatgaggaactt
acatccaaagtcgatgctcttcttgagctccgaaggtcttccactgagaatgaagcagat
ttgtcgtttaaacttgctgaggttgagaaacaattgaacgaaacttcacgctgcttgagc
acaactaaggaaaggatgaaggaccttgaagagaaattaacaagtacacaagaggaatta
tgctgctgcaaaaatgctgctgcttctaacgagcaacaattttcggctgaaatagcgaca
gccactaagcttgttgaattatataaagagagcaccgaagaatggtccaagaaggctgct
gagcttgaaggagtgatcaaagcattggaaactcatttatctcaagttgaagacgagttc
aaggaaaaacttaatcagcaagtatccgagaagaatggtcttgagaaggaggcttctgag
ttgagggagaaactaaacaaatgtgagcttgagcttgagaatgcaagaaaggcaaatgaa
ttggatctaccgatgtttagtttatcagtggatcacatggatacaggtgagagaaatgca
gatctatgtgatggtggcgagaaaatgctggtgccaagaataccaattggtgtatcgggc
acagctttagcagctgctcttcttcgagatggttggagtctagccaaaatgtatgcaaaa
tatcaagaaactgttgatgcattgcgacatgaaaagctggggaggaagcaatcacaggca
attctagagaaggttctgagtgaaattgaagagaaagctgaaattgttttggaggaacgt
gcggagcatgaaaaaatggtggaagcatataatgtgttggaaaataagttgcaaaagtca
ctttctgaccaggctatttttgagaatagcattagggaactgaaggtagaattaaggagg
catgagagggatttagggtctgctgaaaaggagataacggaccttgagagccaggtcacc
attcttcttaaagaatgtcatgacatacaacttcgttgtggtgtgcccagtactatcctc
tctgacaacaccataggacctcggggtgagtcaatagggatagaaagcaggatggataat
tcaccacatcttatgccatttaaaaatatcaatggattagtggagcaaaatgtgaagctt
cgtggccgggttcattctctggagcaccaaaaagatgaaagagaagcagagcttaaggag
gtgtttgaaatggagatgaggaaacgtgaggatgaggcagcttccaaggtggctatagta
ttaagccgggctgaagaacaaggccacatgatagaatcattacacactgctgttggaatg
tacaagagattgtatgaagaggagttaaaaaggcgtggtggaacccccaatacttataca
gaagaacacataccagcagaagttggctggaaggaaaattatttgaatactgaaatatct
caggatgcaaataaaaagggtgatgacaagtcatcggcacgtattaaggatcttgaggag
gatctgcttaaagcaagaaatgaagttgcgtctttacaactggagcgcgataaattagta
atggaggcaaaatttgaacatgaacgatttgagagattccttaaggaatttgaggatctg
agaaaagaagttacggctatgcagtccagaaacgtggagttgtctcaactaatcattgat
caccaaagaaggcttcgtgaaagttctcaatctgtgcaatcatcagaggagctatctcga
aagatgtccatgcaggtctcagctttgcagcatgaaaaggatctcttgctaaattctgag
aagagggccctcgatgaagttcgtgctttatcggaaagagctcatcgactacaggctagt
ctagatgcattccatagtattgaggaggttcgggagaatgccagaatagctgaaaggaga
aaattggagggtgatttgcaaagagtgcagaaggagtgggctgaagctaagcaggagctt
caggatgaaaggaagcttgtacaaaatcttacacgtgatagggaacagacagtaagaact
gccatgcagcaagtagaggatatgaggaaagagttggcagaagcattgaggaatgttgca
agtgcagaggctagagcttctatttctgagacgcgctgcatagacttggaagcaaggctt
aaaagatttgaaaatctggcgaatgcaaatgctggtccaggacatccagtacctgcagtt
gatgatgattttcttgatatagacaaaatgaaggaagagatgagatctttaagagaagaa
gctcaatcctctaaagagcacatgctacagttcaaggaaattgcccaagttaatgaagag
gcactaaaacaaattgaagttgctcataattctttcaaggcagaggctgagaagataaag
acatccttggaatctgaaattgtttccctgagggagcgcatttctgaactagaaagcaat
ttggctgcaaggggattagagttctcttctaccatttctgagaaagatgcagcactttca
tcagctttgactgaaatttcctcattgaaagaaaaaaactctgcattaaactctcagaag
gaagaattagaaatttggattgcttctttgaaggatgacctggagagggagcatcaaaga
tggcggtcagctcaagacaactatgaaagacaagttttgcttcagtcagaggctattcag
gaattgagaaaaacatctgatgcgcttactgctctccaagttgaagcagcagagctacgt
aaacaggcagattcactcagaactgaaaatgaaattttgaaaagaacatgggaaacagaa
aaagtagaactccaaaaattaaaggatgaagcagagctgaagtatattgagatcaatgaa
cagaacaacatattgcttaatcgtctgggagcagtaaatgtccaaattgcagaggagcgc
actctgtcatgtctatctgctgaaggttctgtttctgaaacaaagggagaaggcgattta
cagaccgtgattaattatctacgccgatcaaaagagatagctgagacagagatctcctta
ctgaaacaagagcggttgcggttgcaaactcagcttgaaagtgcactaaaggcttccgag
acagctcagagcatgctgcaagctgaacgtgcaaatacaagaagtcgggtatatagtgat
gaagaatttcaatctcttcagcttcaggtaagggagataaatttgctgcgtgacagtaat
gtgcaactcagggcagagaaccaacacaactttgaggagtgtcagaaagctaatgaagtg
gcacaaaaagctaaatcggagagtgatcacttagctacactcttaagggagaaggaagtg
gagctagaagctgtcaaaaagcaagttgacatgcaaaaggaagagataggactctgggaa
aagaggaactcagagattgtgagcagctacaagaatcttgatatggaagattatgaacaa
atgaaggaaaatttcaaagacatgcaggagaaacttaaaactatggaggttgagttacag
gaatcacagagccttcttgtcaaaaagaaagagaatgtttccgacctagagcaggaaata
gctaacaaggaacttaaattaaatgagatgcagaagcagcttcaggatgttactgcgaat
gtggaaattctcaagtcaaaggaacaaaagcagaagcacactattctgcactggaagaga
agaactgaggaattgagtagagagaaggatgagttattcaaagagaaacaggctatttct
aagcagcttgaggagtctagagcagttggtaagaggtccctcggggaagcagcaaagcag
catgaagtagcagctcgccaagaactagcagctcatcatgaccaagccctaaaagaaaag
gataccaggatccagagtcttgaaaaaatactcgagagagcaagagaagatttgcagaag
gagagggatgagcttcggagagaaaaagctgtgcgtgtaaaggatcggaaaacttttatg
gagcttgctcagaaatctgttcaggccaagaaagagctggaagagaagcttgataaacat
aagcatcaaagggaaagccttattgagagtggagttccaacaacagtgctaccctctgat
gtggagttggatgagaagatgaccaactacttgcagtgtgtggatcaggttgaggaggca
gcaaatttactttccagtgatgtgcttgcttctcagtctgtttcatcttccatttctgta
cacgcagaatcagtgcctggcaatgagcgaaaaactggacggcttgttggtgctgtatcc
tcgactacccatccagtatatcctcctgcttcagttcaccctcctcagataaaagatgct
gatgaaaagactgacaaatctaatgttccaaagcctgtagcagaaacacggaaacctggg
agaaagctaatccgtcctcaattaggagaggatcaggctgcacatccatctactagagaa
gtccatcgcgaacgttcggaacctgcctctgagatcttgccttctttggagcaatctgaa
catgttgctgaaacagaggtggctgagatggagactgaaagcaacctagaagaaggtaga
tcagtggctattaaccccgaactttccaatgaagggatggaaatgtcaggtcggaagcgt
gttttagattccagttcatctgatttgcaagaagggtttgtacatcaggatgccaaaaaa
cctaaacattctgattcctcccatgaagatatagatggtggtgctaataaattgtccgat
aatcccgatctgccactctctggtccagatgcaattgcacctgaatcaaatgagccagag
attttttatgcttccaaagctggagatatggagattgagaatgagccagccatggcttct
gttgaagcagtagtcgtcagtgacttggagaccgcaaatgttgaaccaggtgatgcagtg
gaggctttggatggacctgtagatgcagatgattcatttgaagggggtaatgttgtagct
aaagatactcctgtagcaattgatgaagaaagggaagaaggggaatttgtttccgattca
gcacaggatatcgatgagacagctaaccccgaacaatctcagacaccatctgaatcttgt
gccgctggttctgatgccgaagatgaacctgaaggtaccgttaatatgaaaaatacagaa
gttacatcatctgtgctgactgatgatccaaaagaggtggccacttcaactcctacggag
cacagcaccaatgatactccggcattgctacaggacccagttgcaagcggggcatccgat
acaagtgatcctaatgtgaaaaagcaagctagtccgggtgaggtgtcagaatcaaaggac
agggagacgtcgacaggtaggactgttataaatattccagagagagctaggatgagggcg
attgctaggagttcaggaattgcttccagtccgtctggtaggggtcgtgggagaacttca
agaggcagcctaaagaaggatactggtgccggacgtggtggtcgtggagcccgtcgctag
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integrated database retrieval system
